RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CSTF2P33240 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 EIF4A3P38919 411 aaKnown RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 PMS2P54278 862 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 TBX4P57082 545 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 ALCAMQ13740 583 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 ELOAQ14241 798 aaKnown RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 CRTC2Q53ET0 693 aaPredicted RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 JMJD6Q6NYC1 403 aaPredicted RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 LGI2Q8N0V4 545 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 AGBL5Q8NDL9 886 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 DNAJC19Q96DA6 116 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 LATS2Q9NRM7 1088 aa12.41□□□□□ -0.42
ATPAF1-205ENST00000487193 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 E7ENQ6 273 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 IGLV3-27P01718 113 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 CD58P19256 250 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 ASPAP45381 313 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 HK3P52790 923 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 NUCB2P80303 420 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 ZRSR2Q15696 482 aaKnown RBP12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 SGSM1Q2NKQ1 1148 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 ZNF394Q53GI3 561 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 Q8NA96 180 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 CHST14Q8NCH0 376 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 TMIEQ8NEW7 156 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 RNF31Q96EP0 1072 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 HDAC8Q9BY41 377 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 SPRY4Q9C004 299 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 OLFML3Q9NRN5 406 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 TACC2O95359 2948 aa12.4□□□□□ -0.42
ATPAF1-205ENST00000487193 A6NCN8 305 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 LRRTM2O43300 516 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 KATNA1O75449 491 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 MOCS2O96007 188 aaPredicted RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 GJB2P29033 226 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 CLCN1P35523 988 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 BLKP51451 505 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 SRSF11Q05519 484 aaKnown RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 SLC12A1Q13621 1099 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 MACC1Q6ZN28 852 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 ZNF438Q7Z4V0 828 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 CIR1Q86X95 450 aaPredicted RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 RTP4Q96DX8 246 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 SLC25A23Q9BV35 468 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 UBXN6Q9BZV1 441 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
ATPAF1-205ENST00000487193 B4DGG1 531 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 TULP2O00295 520 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 INPP4BO15327 924 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 ZG16O60844 167 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 PPP6R2O75170 966 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 PRNPP04156 253 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 ADRB3P13945 408 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 HOXD13P35453 343 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 IGFALSP35858 605 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 DLSTP36957 453 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 NEK3P51956 506 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 LIMK2P53671 638 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 YPEL5P62699 121 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 C14orf28Q4W4Y0 310 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 ENPP7Q6UWV6 458 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 PLEKHO2Q8TD55 490 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 KCTD13Q8WZ19 329 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 TWSG1Q9GZX9 223 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
ATPAF1-205ENST00000487193 NEMP1O14524 444 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 LEFTY1O75610 366 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 STK17BO94768 372 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 RASGRP1O95267 797 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms