RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 CAPN10Q9HC96 672 aa12.84□□□□□ -0.35
ECHDC2-213ENST00000487040 ETNK2Q9NVF9 386 aa12.84□□□□□ -0.35
ECHDC2-213ENST00000487040 DDX56Q9NY93 547 aaKnown RBP12.84□□□□□ -0.35
ECHDC2-213ENST00000487040 EIF2B4Q9UI10 523 aaKnown RBP12.84□□□□□ -0.35
ECHDC2-213ENST00000487040 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
ECHDC2-213ENST00000487040 TBC1D3DA0A087WVF3 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3IA0A087WXS9 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3EA0A087X179 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3KA0A087X1G2 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 A0A1W2PPC4 97 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3FA6NER0 549 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PATE3B3GLJ2 98 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3LB9A6J9 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 KRIT1O00522 736 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PSTPIP1O43586 416 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PALMO75781 387 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 SYPP08247 313 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 CD48P09326 243 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3HP0C7X1 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 COMTP21964 271 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 KDELR1P24390 212 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 MAOBP27338 520 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 CSNK1DP48730 415 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 RENBPP51606 427 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 AFF3P51826 1226 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 NEK3P51956 506 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 IRX4P78413 519 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 CYTH1Q15438 398 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 POM121L1PQ3SYA9 428 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ATP13A4Q4VNC1 1196 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ODF2Q5BJF6 829 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ZNF805Q5CZA5 627 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ATXN7L2Q5T6C5 722 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3GQ6DHY5 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3CQ6IPX1 549 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TRIM69Q86WT6 500 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TMEM139Q8IV31 216 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 TBC1D3Q8IZP1 549 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 BBS5Q8N3I7 341 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ZCCHC9Q8N567 271 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 NSMCE1Q8WV22 266 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 ARRDC3Q96B67 414 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 CINPQ9BW66 212 aaPredicted RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 MIR1-1HGQ9H1L0 117 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 LHX3Q9UBR4 397 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 SEPT3Q9UH03 358 aa12.83□□□□□ -0.36
ECHDC2-213ENST00000487040 LAMA1P25391 3075 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 CEP250Q9BV73 2442 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 PLK4O00444 970 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 SLC30A4O14863 429 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 PJA2O43164 708 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 LATO43561 262 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 AP1G1O43747 822 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 UGT2B4P06133 528 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 ADRB3P13945 408 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 MX2P20592 715 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 MAPK8P45983 427 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 SUOXP51687 545 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 VAV2P52735 878 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 ATXN3P54252 364 aaPredicted RBP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 NSUN2Q08J23 767 aaKnown RBP eCLIP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 TEAD4Q15561 434 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 RSPO4Q2I0M5 234 aaPredicted RBP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 STPG1Q5TH74 334 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 NCBP2-AS2Q69YL0 99 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 FBXL19Q6PCT2 694 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 GDPD4Q6W3E5 623 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 OR6K2Q8NGY2 324 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 HCAR2Q8TDS4 363 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 RAPGEF5Q92565 580 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 PSKH2Q96QS6 385 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 RTKNQ9BST9 563 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 KLHL11Q9NVR0 708 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 DLL3Q9NYJ7 618 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 DKK3Q9UBP4 350 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 DMTF1Q9Y222 760 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 REXO2Q9Y3B8 237 aaKnown RBP12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 ALG6Q9Y672 507 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 SPTBN4Q9H254 2564 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 NUMA1Q14980 2115 aa12.82□□□□□ -0.36
ECHDC2-213ENST00000487040 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms