RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 HS3ST3A1Q9Y663 406 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 WASF2Q9Y6W5 498 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 MAP1BP46821 2468 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 PLXNA2O75051 1894 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 TMEM131Q92545 1883 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 A0A1B0GTQ1 180 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 A0A1B0GVT2 93 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 PRAMEF26H0Y7S4 382 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 GIPC1O14908 333 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 YKT6O15498 198 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 FLRT2O43155 660 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 WIPF1O43516 503 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 RAMP2O60895 175 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 LEFTY1O75610 366 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 WNT1P04628 370 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 TPM3P06753 285 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 GLDCP23378 1020 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 ITGB7P26010 798 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 ACVRL1P37023 503 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 MAPK8P45983 427 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 RECQLP46063 649 aaPredicted RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 PSMD8P48556 350 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 CSNK1DP48730 415 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 SUOXP51687 545 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 TAS2R38P59533 333 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 SNRPD1P62314 119 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 OGDHQ02218 1023 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 NSUN2Q08J23 767 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS50-218ENST00000485994 CNTN1Q12860 1018 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 PIGHQ14442 188 aaPredicted RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 GRM3Q14832 879 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 TRIP6Q15654 476 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 KIF19Q2TAC6 998 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 MYLK3Q32MK0 819 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 SLC45A4Q5BKX6 768 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 PIP5KL1Q5T9C9 394 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 TMCO4Q5TGY1 634 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 AFMIDQ63HM1 303 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 RWDD4Q6NW29 188 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 SCYL2Q6P3W7 929 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 CYP4V2Q6ZWL3 525 aaPredicted RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 ERN2Q76MJ5 926 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 DCP2Q8IU60 420 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 PYROXD2Q8N2H3 581 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 OXR1Q8N573 874 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 LZTR1Q8N653 840 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 NIPA2Q8N8Q9 360 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 OR2AP1Q8NGE2 309 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 BAHD1Q8TBE0 780 aaPredicted RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 FEM1CQ96JP0 617 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 LENG8Q96PV6 779 aaPredicted RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 CDC6Q99741 560 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 OSBPL1AQ9BXW6 950 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 LRRC19Q9H756 370 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 FSCN3Q9NQT6 498 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 DKK3Q9UBP4 350 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 CNOT8Q9UFF9 292 aaKnown RBP7.13□□□□□ -1.27
VPS50-218ENST00000485994 IL36AQ9UHA7 158 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 DNAI1Q9UI46 699 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 LCMT1Q9UIC8 334 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 ANGPTL2Q9UKU9 493 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 PCOLCE2Q9UKZ9 415 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 SNX11Q9Y5W9 270 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 SLCO1B1Q9Y6L6 691 aa7.13□□□□□ -1.27
VPS50-218ENST00000485994 ACACAQ13085 2346 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SSU72P8A0A1W2PR75 194 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 FAM47DPA6NHR8 397 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 RASA4BC9J798 803 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TLR4O00206 839 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TOR1BO14657 336 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 RASA4O43374 803 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CBFA2T2O43439 604 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TSPAN6O43657 245 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SH3BP5O60239 455 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 LRCH4O75427 683 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 DKK1O94907 266 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 GYPCP04921 128 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CYP1A2P05177 515 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CDK4P11802 303 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SKILP12757 684 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 PSMA2P25787 234 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 MIPP30301 263 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CCNHP51946 323 aaPredicted RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 NEK3P51956 506 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 METAP1P53582 386 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 C21orf59P57076 290 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 RAD51Q06609 339 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TRIM14Q14142 442 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 STAT4Q14765 748 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 ASTE1Q2TB18 679 aaPredicted RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 TMEM259Q4ZIN3 620 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SETMARQ53H47 684 aaPredicted RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 ZNF805Q5CZA5 627 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 NAPEPLDQ6IQ20 393 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 ALKBH5Q6P6C2 394 aaKnown RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 LINGO4Q6UY18 593 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 HORMAD1Q86X24 394 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CACUL1Q86Y37 369 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms