RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CCDC6Q16204 474 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 MAP7D1Q3KQU3 841 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
APTX-227ENST00000485479 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
APTX-227ENST00000485479 KBTBD6Q86V97 674 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 WDR5BQ86VZ2 330 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 CAMK1DQ8IU85 385 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 CCDC13Q8IYE1 715 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 HDDC3Q8N4P3 179 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 NELL1Q92832 810 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 HDAC11Q96DB2 347 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 TOE1Q96GM8 510 aaKnown RBP12.05□□□□□ -0.48
APTX-227ENST00000485479 MS4A14Q96JA4 679 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 AGAP3Q96P47 875 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 CEP44Q9C0F1 390 aa12.05□□□□□ -0.48
APTX-227ENST00000485479 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
APTX-227ENST00000485479 H7C0C1 242 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 ZNF185O15231 689 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 KIF5CO60282 957 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 IGSF6O95976 241 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 JCHAINP01591 159 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 TGM2P21980 687 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 P2RY2P41231 377 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 ATP5OP48047 213 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 PTPN5P54829 565 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 SNRPD1P62314 119 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 DSC2Q02487 901 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 KLF1Q13351 362 aaPredicted RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 PTPRRQ15256 657 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 MYLK3Q32MK0 819 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 ZNF528Q3MIS6 628 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 CEP68Q76N32 757 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 COG1Q8WTW3 980 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 GDAP1L1Q96MZ0 367 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 KLHL32Q96NJ5 620 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 OMDQ99983 421 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 HEPHQ9BQS7 1158 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 GPR174Q9BXC1 333 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 PABPC3Q9H361 631 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 RBM22Q9NW64 420 aaKnown RBP eCLIP12.04□□□□□ -0.48
APTX-227ENST00000485479 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 USP36Q9P275 1121 aaKnown RBP12.04□□□□□ -0.48
APTX-227ENST00000485479 GGT7Q9UJ14 662 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 SPAG17Q6Q759 2223 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 CEP192Q8TEP8 1941 aa12.04□□□□□ -0.48
APTX-227ENST00000485479 A0A0U1RQS6 177 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 MATN3O15232 486 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 CEP104O60308 925 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 APOC2P02655 101 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 ZFXP17010 805 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 MX2P20592 715 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 RBL1P28749 1068 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PTGER3P43115 390 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 COPS2P61201 443 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 RPL6Q02878 288 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 SIM2Q14190 667 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 USP39Q53GS9 565 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 PARS2Q7L3T8 475 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 TAB3Q8N5C8 712 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 CNTD1Q8N815 330 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PDCD6IPQ8WUM4 868 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 GAB3Q8WWW8 586 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 CCDC114Q96M63 670 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 SMIM14Q96QK8 99 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 SEPT3Q9UH03 358 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PCDHGA2Q9Y5H1 932 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 SLCO1B1Q9Y6L6 691 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 DMXL1Q9Y485 3027 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 MAP3K13O43283 966 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 NEBLO76041 1014 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 TJP3O95049 919 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 GSRP00390 522 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 FGGP02679 453 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 CCNCP24863 283 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 MAOBP27338 520 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 HOXA6P31267 233 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PTPN7P35236 360 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 NHLH1Q02575 133 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 SNX1Q13596 522 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PDK1Q15118 436 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PRKD1Q15139 912 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms