RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 NME7Q9Y5B8 376 aa9.38□□□□□ -0.91
USP16-206ENST00000485067 NRCAMQ92823 1304 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 A8MX80 341 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 KPNA5O15131 536 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 KCNN4O15554 427 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SLC7A4O43246 635 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ZBED1O96006 694 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ITGB1P05556 798 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ATF6P18850 670 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 POLR2CP19387 275 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 HOXA11P31270 313 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 PNPLA4P41247 253 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ELK3P41970 407 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 RPL34P49207 117 aaKnown RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 SLC12A2P55011 1212 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ATP11AP98196 1134 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 BEX3Q00994 111 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SF3A3Q12874 501 aaKnown RBP eCLIP9.37□□□□□ -0.91
USP16-206ENST00000485067 TRIM32Q13049 653 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 CYLC2Q14093 348 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 CDO1Q16878 200 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 GLRA4Q5JXX5 417 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 OLFML2BQ68BL8 750 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ANO7Q6IWH7 933 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SCYL2Q6P3W7 929 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 NPNTQ6UXI9 565 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ALKAL1Q6UXT8 129 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 FAM47EQ6ZV65 393 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ASRGL1Q7L266 308 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 PLEKHH3Q7Z736 793 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 ACOT1Q86TX2 421 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ECHDC2Q86YB7 292 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 PGBD3Q8N328 593 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 TAB3Q8N5C8 712 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 BANPQ8N9N5 519 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 MCUQ8NE86 351 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 TMEM40Q8WWA1 233 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 CENPIQ92674 756 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 RNF34Q969K3 372 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 RAB3IPQ96QF0 476 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 MNTQ99583 582 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 PIP5K1AQ99755 562 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 DENND2DQ9H6A0 471 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 SNTG2Q9NY99 539 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 UBQLN1Q9UMX0 589 aaKnown RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 MTF2Q9Y483 593 aaPredicted RBP9.37□□□□□ -0.91
USP16-206ENST00000485067 ZNF236Q9UL36 1845 aa9.37□□□□□ -0.91
USP16-206ENST00000485067 SMIM35A0A1B0GVV1 85 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 TCRBV9S1A1TA0A576 114 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 FBP2O00757 339 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 HGSO14964 777 aaPredicted RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 PAPSS1O43252 624 aaPredicted RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 UNC5CO95185 931 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 LMNAP02545 664 aaKnown RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 INHBAP08476 426 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 GALNSP34059 522 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SOX6P35712 828 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 RGS7P49802 495 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 CLCN4P51793 760 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 BCAT1P54687 386 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 BST2Q10589 180 aaKnown RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 SGCGQ13326 291 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 DPYSL2Q16555 572 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 LGSNQ5TDP6 509 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 RANBP10Q6VN20 620 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 AGMOQ6ZNB7 445 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SLC26A9Q7LBE3 791 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SCUBE3Q8IX30 993 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 CRYBG2Q8N1P7 616 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 PQLC3Q8N755 202 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 CCNYL1Q8N7R7 359 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP16-206ENST00000485067 EFHD2Q96C19 240 aaPredicted RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 ZNF560Q96MR9 790 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 LRRC37BQ96QE4 947 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 OSMRQ99650 979 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 HEPHQ9BQS7 1158 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SNRNP25Q9BV90 132 aaKnown RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 PITHD1Q9GZP4 211 aaPredicted RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 NMRK2Q9NPI5 230 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SAGE1Q9NXZ1 904 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 BAIAP2L1Q9UHR4 511 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SH3BGRL2Q9UJC5 107 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.36□□□□□ -0.91
USP16-206ENST00000485067 C1orf232A0A0U1RR37 186 aa9.36□□□□□ -0.91
USP16-206ENST00000485067 KBTBD13C9JR72 458 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms