RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 DCDC2CA8MYV0 355 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CLPXO76031 633 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ANGPTL1O95841 491 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SCN4BQ8IWT1 228 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 THEM5Q8N1Q8 247 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 TBC1D19Q8N5T2 526 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ACOX2Q99424 681 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 MYO5CQ9NQX4 1742 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PRH1P02810 166 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 OXCT1P55809 520 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CDKL1Q00532 357 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 GRM4Q14833 912 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 TIGD4Q8IY51 512 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CADM1Q9BY67 442 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 MAF1Q9H063 256 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 INO80Q9ULG1 1556 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ANXA9O76027 345 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ENTPD1P49961 510 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 RAB5BP61020 215 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SLC18A2Q05940 514 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SPOCD1Q6ZMY3 1216 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 KIF18BQ86Y91 864 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 IQCKQ8N0W5 287 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SLC34A3Q8N130 599 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 EFHBQ8N7U6 833 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ACMSDQ8TDX5 336 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 MED15Q96RN5 788 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 MAP3K14Q99558 947 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 POLE4Q9NR33 117 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PI4KBQ9UBF8 816 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PADI2Q9Y2J8 665 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SNX9Q9Y5X1 595 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 LAMC3Q9Y6N6 1575 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CRABP2P29373 138 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PPP2R1BP30154 601 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ALDH3A2P51648 485 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PLK1P53350 603 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 GABBR1Q9UBS5 961 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 USP18Q9UMW8 372 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CCNDBP1O95273 360 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PGLSO95336 258 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 GPC1P35052 558 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 VMACQ2NL98 169 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CLIP4Q8N3C7 705 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 VAT1Q99536 393 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PCYOX1Q9UHG3 505 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 FSHRP23945 695 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 YAP1P46937 504 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 HECTD3Q5T447 861 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 AHSA2Q719I0 299 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 RACGAP1Q9H0H5 632 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SPANXN3Q5MJ09 141 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ZNF621Q6ZSS3 439 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CBR4Q8N4T8 237 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 TRPV3Q8NET8 790 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 IL7P13232 177 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 Q3C1V9 767 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 MRNIPQ6NTE8 343 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PIGWQ7Z7B1 504 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 JPH3Q8WXH2 748 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 VPS51Q9UID3 782 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PDE10AQ9Y233 779 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 MAGEB2O15479 319 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CYP11B1P15538 503 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ZNF549Q6P9A3 640 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SSX6Q7RTT6 188 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CDK20Q8IZL9 346 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 BPIFB1Q8TDL5 484 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 TMEM246Q9BRR3 403 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ADI1Q9BV57 179 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 FICDQ9BVA6 458 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SH3PXD2BA1X283 911 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ACADLP28330 430 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 KCNMB4Q86W47 210 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 COQ10BQ9H8M1 238 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PDGFCQ9NRA1 345 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 RASSF1Q9NS23 344 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 AXIN2Q9Y2T1 843 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PCDHA3Q9Y5H8 950 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ST14Q9Y5Y6 855 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 BTBD19C9JJ37 291 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 STOMP27105 288 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms