RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 RAB7BQ96AH8 199 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 CCDC120Q96HB5 630 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 SLC46A1Q96NT5 459 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 PARK7Q99497 189 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 GPR20Q99678 358 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 PKP2Q99959 881 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 THUMPD2Q9BTF0 503 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 MRI1Q9BV20 369 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 ACPTQ9BZG2 426 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 PCED1AQ9H1Q7 454 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 TTYH1Q9H313 450 aaPredicted RBP5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 TUFT1Q9NNX1 390 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 KCNK9Q9NPC2 374 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 IARS2Q9NSE4 1012 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 THAP1Q9NVV9 213 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 GDE1Q9NZC3 331 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 TMOD2Q9NZR1 351 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 CNIH4Q9P003 139 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 SEPT10Q9P0V9 454 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 CLIP2Q9UDT6 1046 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 STEAP1Q9UHE8 339 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 VPS51Q9UID3 782 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 ITGA11Q9UKX5 1188 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 KCNK7Q9Y2U2 307 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 LIPGQ9Y5X9 500 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 CAPN7Q9Y6W3 813 aa5.25□□□□□ -1.57
R3HDM1-216ENST00000483065 LOC105369274A0A096LPK9 316 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 LOC102723532A0A0G2JNH3 316 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TCRBV7S2A1N4TA0A589 114 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 KDM4EB2RXH2 506 aaPredicted RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 H0YIV9 168 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 GNB5O14775 395 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 PER2O15055 1255 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TO15178 435 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 SMAD9O15198 467 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CTIFO43310 598 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 VEGFDO43915 354 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TADA2AO75478 443 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 RHOBTB1O94844 696 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ONECUT2O95948 504 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 HMGCRP04035 888 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CEACAM5P06731 702 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 HOXB5P09067 269 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 GZMAP12544 262 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TRIM21P19474 475 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 EEF1B2P24534 225 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 PON1P27169 355 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 POU1F1P28069 291 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 HOXD10P28358 340 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 GDI1P31150 447 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MDH1P40925 334 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 KIR2DL3P43628 341 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 IRAK1P51617 712 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ARSEP51690 589 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 OXCT1P55809 520 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 YWHAZP63104 245 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ARHGAP8P85298 464 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ACSM2AQ08AH3 577 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 SEMA3BQ13214 749 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 NR1I3Q14994 352 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ZRSR1Q15695 479 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ACSM2BQ68CK6 577 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CCDC144NLQ6NUI1 221 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ZNF529Q6P280 563 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 PAQR3Q6TCH7 311 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ZAR1Q86SH2 424 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MCEMP1Q8IX19 187 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 SPACA3Q8IXA5 215 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CFAP206Q8IYR0 622 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TMEFF1Q8IYR6 380 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 OR4N4Q8N0Y3 316 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 LILRA2Q8N149 483 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 GUF1Q8N442 669 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MB21D1Q8N884 522 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 SLC17A8Q8NDX2 589 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 OR52K1Q8NGK4 314 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 C9orf43Q8TAL5 461 aaPredicted RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MDM1Q8TC05 714 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ST7LQ8TDW4 575 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ASB11Q8WXH4 323 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 GCDHQ92947 438 aaPredicted RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 MIEF2Q96C03 454 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TSPAN17Q96FV3 270 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 C5orf30Q96GV9 206 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CEP295NLQ96MC4 621 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 PAFAH2Q99487 392 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 ZPBPQ9BS86 351 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 NTPCRQ9BSD7 190 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 INPP5KQ9BT40 448 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TLR10Q9BXR5 811 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TRIM7Q9C029 511 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 TTYH3Q9C0H2 523 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 CLPBQ9H078 707 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 EPC1Q9H2F5 836 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 POLR1BQ9H9Y6 1135 aa5.24□□□□□ -1.57
R3HDM1-216ENST00000483065 FANCEQ9HB96 536 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms