RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TKTL2Q9H0I9 626 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TCEAL2Q9H3H9 227 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 WDCPQ9H6R7 721 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PIGVQ9NUD9 493 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ARHGEF38Q9NXL2 777 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 NCKIPSDQ9NZQ3 722 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 MAN1B1Q9UKM7 699 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PCDHGA8Q9Y5G5 932 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 FADS3Q9Y5Q0 445 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 MAST4O15021 2626 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 GOLGA6L4A6NEF3 574 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 PPP1R3GB7ZBB8 358 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 NEMP1O14524 444 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 TPP1O14773 563 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 AP1G1O43747 822 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SRGAP2O75044 1071 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 TCEA3O75764 348 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ZMPSTE24O75844 475 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 GNA14O95837 355 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ERBB2P04626 1255 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ITGB7P26010 798 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 OR1E1P30953 314 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 RPIAP49247 311 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ADKP55263 362 aaKnown RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 STX17P56962 302 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 APBA1Q02410 837 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SLC20A2Q08357 652 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 NFATC3Q12968 1075 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ARL13BQ3SXY8 428 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 CARD16Q5EG05 197 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 PRRT3Q5FWE3 981 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 OTUD1Q5VV17 481 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 RETSATQ6NUM9 610 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ENOSF1Q7L5Y1 443 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SLC26A9Q7LBE3 791 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 CLEC14AQ86T13 490 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SLC35F3Q8IY50 421 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 RBFAQ8N0V3 343 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 PCDH20Q8N6Y1 951 aaKnown RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 C1orf131Q8NDD1 294 aaKnown RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 LENG8Q96PV6 779 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 CCNL2Q96S94 520 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 NPY6RQ99463 290 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 BOCQ9BWV1 1114 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SRRTQ9BXP5 876 aaKnown RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SYNCQ9H7C4 482 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SYNDIG1Q9H7V2 258 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 HECAQ9UBI9 543 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 SPASTQ9UBP0 616 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 HOOK1Q9UJC3 728 aaKnown RBP7.52□□□□□ -1.21
CSDE1-206ENST00000483030 PADI4Q9UM07 663 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 CTNND2Q9UQB3 1225 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 ACTL7AQ9Y615 435 aa7.52□□□□□ -1.21
CSDE1-206ENST00000483030 CCDC187A0A096LP49 1063 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 BICDL2A1A5D9 508 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ILVBLA1L0T0 632 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 C16orf96A6NNT2 1141 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 LMO7DNF2Z398 122 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 YY2O15391 372 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TSPAN6O43657 245 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 DAB1O75553 588 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 F9P00740 461 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ANXA6P08133 673 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ITGA2BP08514 1039 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SLC9A1P19634 815 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 BMP6P22004 513 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SLC5A2P31639 672 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 GKP32189 559 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 KRT9P35527 623 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PPP1R2P41236 205 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ABL2P42684 1182 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SULT1E1P49888 294 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SERPINH1P50454 418 aaKnown RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CSRP3P50461 194 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CCNHP51946 323 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 THOP1P52888 689 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PDX1P52945 283 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SNX16P57768 344 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PFN3P60673 137 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PTK2Q05397 1052 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 DEUP1Q05D60 604 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SPIDRQ14159 915 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TGIF1Q15583 401 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 LINC00303Q3SY05 128 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PTPN20Q4JDL3 420 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 BRMS1LQ5PSV4 323 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 FAXCQ5TGI0 409 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 FOXR2Q6PJQ5 311 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 USP53Q70EK8 1073 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PARS2Q7L3T8 475 aaKnown RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CREBRFQ8IUR6 639 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PHACTR4Q8IZ21 702 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 RYBPQ8N488 228 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 FBXO39Q8N4B4 442 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ZNF397Q8NF99 534 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms