RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DPP10Q8N608 796 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ANKRD52Q8NB46 1076 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ADAMTS15Q8TE58 950 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 PIGOQ8TEQ8 1089 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ATOH1Q92858 354 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-210ENST00000482158 B3GNT4Q9C0J1 378 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 MPP6Q9NZW5 540 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 SEL1LQ9UBV2 794 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 PCDHGB5Q9Y5G0 923 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 SLC25A17O43808 307 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 HEXAP06865 529 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 PRF1P14222 555 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 FMO4P31512 558 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 TTKP33981 857 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 GAD2Q05329 585 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 KLF9Q13886 244 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-210ENST00000482158 RBMS2Q15434 407 aaKnown RBP6.04□□□□□ -1.44
SF3B1-210ENST00000482158 SERTAD4-AS1Q5TG53 156 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 CCDC30Q5VVM6 783 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 NUGGCQ68CJ6 796 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 HAUS3Q68CZ6 603 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 SHC4Q6S5L8 630 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 ATF7IPQ6VMQ6 1270 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 FAM185AQ8N0U4 392 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 CNTROBQ8N137 903 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 C11orf65Q8NCR3 313 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 RASSF8Q8NHQ8 419 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 TMEM174Q8WUU8 243 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 KLHL29Q96CT2 875 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 SPRTNQ9H040 489 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-210ENST00000482158 BRF2Q9HAW0 419 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 BABAM1Q9NWV8 329 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 TRNAU1APQ9NX07 287 aaKnown RBP6.04□□□□□ -1.44
SF3B1-210ENST00000482158 RAP2CQ9Y3L5 183 aa6.04□□□□□ -1.44
SF3B1-210ENST00000482158 C17orf102A2RUQ5 167 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 PGPEP1LA6NFU8 196 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 MDM4O15151 490 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 PPFIA2O75334 1257 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 EPN2O95208 641 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 DDX58O95786 925 aaKnown RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 CLEC3BP05452 202 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 CTPS1P17812 591 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 RYKP34925 604 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 ABCG1P45844 678 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 CXCR3P49682 368 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 EIF5P55010 431 aaKnown RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 DPY19L2P1Q6NXN4 242 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 FAM217AQ8IXS0 508 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 HORMAD2Q8N7B1 307 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 MCPH1Q8NEM0 835 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 PERPQ96FX8 193 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 WDR77Q9BQA1 342 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 TRMOQ9BU70 441 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 TUBA8Q9NY65 449 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 MAP3K20Q9NYL2 800 aaKnown RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 SLC4A4Q9Y6R1 1079 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 PIAS3Q9Y6X2 628 aa6.03□□□□□ -1.44
SF3B1-210ENST00000482158 TDRD9Q8NDG6 1382 aaKnown RBP6.03□□□□□ -1.44
SF3B1-210ENST00000482158 WDR91A4D1P6 747 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 TAF4O00268 1085 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 EBAG9O00559 213 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 NDUFB8O95169 186 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 CLDN7O95471 211 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 IFNA2P01563 188 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 FGBP02675 491 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 TMPRSS3P57727 454 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 CLDN2P57739 230 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 DCTN2Q13561 401 aaKnown RBP6.02□□□□□ -1.45
SF3B1-210ENST00000482158 ERV3-1Q14264 604 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 TXNDC8Q6A555 127 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 RRM2BQ7LG56 351 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 GPAT4Q86UL3 456 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 TMC8Q8IU68 726 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 ZNF548Q8NEK5 533 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-210ENST00000482158 ZMIZ2Q8NF64 920 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 ENGASEQ8NFI3 743 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 CHCHD6Q9BRQ6 235 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 MVB12BQ9H7P6 319 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 CTNNAL1Q9UBT7 734 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.02□□□□□ -1.45
SF3B1-210ENST00000482158 RUSC2Q8N2Y8 1516 aa6.02□□□□□ -1.45
SF3B1-210ENST00000482158 TMEM272A0A1B0GTI8 110 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 SEC31AO94979 1220 aaKnown RBP6.01□□□□□ -1.45
SF3B1-210ENST00000482158 SLC2A4P14672 509 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 MAPK4P31152 587 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 CPOXP36551 454 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 ARL1P40616 181 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-210ENST00000482158 POLD2P49005 469 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 TAF11Q15544 211 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 ODF3L2Q3SX64 289 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 SNX30Q5VWJ9 437 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 NEK10Q6ZWH5 1172 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 ARFGAP1Q8N6T3 406 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 NANOGP1Q8N7R0 232 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 CEP76Q8TAP6 659 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 NOC3LQ8WTT2 800 aaKnown RBP6.01□□□□□ -1.45
SF3B1-210ENST00000482158 INPP5DQ92835 1189 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 SAAL1Q96ER3 474 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms