RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 DTX1Q86Y01 620 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 GUF1Q8N442 669 aaKnown RBP15.24■□□□□ 0.03
HDAC6-224ENST00000481929 USP7Q93009 1102 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 C1QTNF2Q9BXJ5 285 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 CLPBQ9H078 707 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 TNKS2Q9H2K2 1166 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 LRRN3Q9H3W5 708 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 SIRPGQ9P1W8 387 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 VPS51Q9UID3 782 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 VANGL2Q9ULK5 521 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 TBC1D30Q9Y2I9 924 aa15.24■□□□□ 0.03
HDAC6-224ENST00000481929 ZFC3H1O60293 1989 aaKnown RBP15.24■□□□□ 0.03
HDAC6-224ENST00000481929 SYNJ2BP-COX16A0A087WUM0 186 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 AGRPO00253 132 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 SMAD6O43541 496 aaKnown RBP15.23■□□□□ 0.03
HDAC6-224ENST00000481929 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 L1CAMP32004 1257 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 ETV5P41161 510 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 MAPK10P53779 464 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 YWHAZP63104 245 aaKnown RBP15.23■□□□□ 0.03
HDAC6-224ENST00000481929 AUHQ13825 339 aaKnown RBP15.23■□□□□ 0.03
HDAC6-224ENST00000481929 EDRF1Q3B7T1 1238 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 FSTL5Q8N475 847 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-224ENST00000481929 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 PCDH19Q8TAB3 1148 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 ASB12Q8WXK4 309 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 PSMB7Q99436 277 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 CMKLR1Q99788 373 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 SLC12A9Q9BXP2 914 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 DDIT4Q9NX09 232 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 WASF2Q9Y6W5 498 aa15.23■□□□□ 0.03
HDAC6-224ENST00000481929 NEMP1O14524 444 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 CETN3O15182 167 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 TSPAN6O43657 245 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 CALCAP01258 141 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 RHOCP08134 193 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 CELA2BP08218 269 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-224ENST00000481929 ALPIP09923 528 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
HDAC6-224ENST00000481929 CDH4P55283 916 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 CDK17Q00537 523 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 PPARDQ03181 441 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 MTA1Q13330 715 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 EIF4EBP2Q13542 120 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-224ENST00000481929 ELOCQ15369 112 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 LVRNQ6Q4G3 990 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 LINGO4Q6UY18 593 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 MACC1Q6ZN28 852 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 PARS2Q7L3T8 475 aaKnown RBP15.22■□□□□ 0.03
HDAC6-224ENST00000481929 DCAF4L2Q8NA75 395 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 KCNK4Q9NYG8 393 aa15.22■□□□□ 0.03
HDAC6-224ENST00000481929 PNMA8BQ9ULN7 279 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-224ENST00000481929 UNC13CQ8NB66 2214 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 C9orf172C9J069 976 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-224ENST00000481929 RNF225M0QZC1 329 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-224ENST00000481929 ENDOD1O94919 500 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 GGCXP38435 758 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 GPD2P43304 727 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 CCR10P46092 362 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 ATP1A2P50993 1020 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 BLKP51451 505 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 YPEL5P62699 121 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 TMEM164Q5U3C3 297 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 HIST2H2BCQ6DN03 193 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 C9orf43Q8TAL5 461 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-224ENST00000481929 JPH3Q8WXH2 748 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-224ENST00000481929 INTS4Q96HW7 963 aaKnown RBP15.21■□□□□ 0.03
HDAC6-224ENST00000481929 MED15Q96RN5 788 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 HEPHQ9BQS7 1158 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 THAP9Q9H5L6 903 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 USP25Q9UHP3 1055 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 GPR34Q9UPC5 381 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 HS3ST4Q9Y661 456 aa15.21■□□□□ 0.03
HDAC6-224ENST00000481929 STMND1H3BQB6 276 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 CTSEP14091 401 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 IGFALSP35858 605 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 ZFP36L1Q07352 338 aaKnown RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 VPS36Q86VN1 386 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 Q8N9G6 341 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 RAB7BQ96AH8 199 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 NT5C1BQ96P26 610 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 B3GNT4Q9C0J1 378 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 PLEKHB1Q9UF11 243 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 PLAAQ9Y263 795 aa15.2■□□□□ 0.02
HDAC6-224ENST00000481929 ANKRD17O75179 2603 aaKnown RBP15.2■□□□□ 0.02
HDAC6-224ENST00000481929 E5RJQ4 531 aa15.19■□□□□ 0.02
HDAC6-224ENST00000481929 TOR1BO14657 336 aa15.19■□□□□ 0.02
HDAC6-224ENST00000481929 CNTN5O94779 1100 aa15.19■□□□□ 0.02
HDAC6-224ENST00000481929 ADCY5O95622 1261 aa15.19■□□□□ 0.02
HDAC6-224ENST00000481929 EIF4A3P38919 411 aaKnown RBP15.19■□□□□ 0.02
HDAC6-224ENST00000481929 ABL2P42684 1182 aa15.19■□□□□ 0.02
HDAC6-224ENST00000481929 DNA2P51530 1060 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms