RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
SH3D21-203ENST00000480549 MPP6Q9NZW5 540 aa17.05■□□□□ 0.32
SH3D21-203ENST00000480549 VANGL2Q9ULK5 521 aa17.05■□□□□ 0.32
SH3D21-203ENST00000480549 WDR91A4D1P6 747 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 TBX4P57082 545 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 MROH9Q5TGP6 573 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 CES3Q6UWW8 571 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 TRIM67Q6ZTA4 783 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 OTOP3Q7RTS5 596 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 USP33Q8TEY7 942 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 FBXO32Q969P5 355 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 IL12RB2Q99665 862 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 ARPC5LQ9BPX5 153 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.323e-8■□□□□ 9.5
SH3D21-203ENST00000480549 WASH4PA8MWX3 477 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 COPEO14579 308 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 POLBP06746 335 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 MTTPP55157 894 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 SPANXN3Q5MJ09 141 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 TIFABQ6ZNK6 161 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 CHSY1Q86X52 802 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 SPATA17Q96L03 361 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 IL1RAPL1Q9NZN1 696 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 MYLKQ15746 1914 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
SH3D21-203ENST00000480549 TBX18O95935 607 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CD97P48960 835 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CCL23P55773 120 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 GSTM4Q03013 218 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 EFEMP1Q12805 493 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 ELAVL2Q12926 359 aaKnown RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 TAF1BQ53T94 588 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PACS1Q6VY07 963 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 TMEM135Q86UB9 458 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 MIPEPQ99797 713 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 NOL6Q9H6R4 1146 aaKnown RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 UBP1Q9NZI7 540 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PSAT1Q9Y617 370 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 EFEMP2O95967 443 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CNTFP26441 200 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PTPN4P29074 926 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 TAF10Q12962 218 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 NAB1Q13506 487 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 OTOAQ7RTW8 1153 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 HSPBAP1Q96EW2 488 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CERS2Q96G23 380 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 SEPT5Q99719 369 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 LRRC40Q9H9A6 602 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PLLPQ9Y342 182 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 MATN3O15232 486 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 NDUFB5O43674 189 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 RNASEH1O60930 286 aaKnown RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 SLC2A3P11169 496 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 MS4A13Q5J8X5 152 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CERCAMQ5T4B2 595 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PRSS55Q6UWB4 352 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CDKL2Q92772 493 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 APOL2Q9BQE5 337 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 CADM1Q9BY67 442 aaKnown RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 ALG13Q9NP73 1137 aaKnown RBP17.03■□□□□ 0.32
SH3D21-203ENST00000480549 BFARQ9NZS9 450 aa17.03■□□□□ 0.32
SH3D21-203ENST00000480549 PABPC4LP0CB38 370 aaKnown RBP17.02■□□□□ 0.32
SH3D21-203ENST00000480549 GRIA2P42262 883 aa17.02■□□□□ 0.32
SH3D21-203ENST00000480549 ATN1P54259 1190 aaPredicted RBP17.02■□□□□ 0.32
SH3D21-203ENST00000480549 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
SH3D21-203ENST00000480549 DNAAF3Q8N9W5 541 aa17.02■□□□□ 0.32
SH3D21-203ENST00000480549 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
SH3D21-203ENST00000480549 ZCWPW2A0A1B0GU75 182 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 H7C4K7 107 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 ERVK-10P10266 1014 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 DUSP4Q13115 394 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 CYLC2Q14093 348 aaPredicted RBP17.02■□□□□ 0.31
SH3D21-203ENST00000480549 PSMD5Q16401 504 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 TMEM259Q4ZIN3 620 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 ANKS3Q6ZW76 656 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 LRRC43Q8N309 656 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 SPATA22Q8NHS9 363 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 MANSC1Q9H8J5 431 aa17.02■□□□□ 0.31
SH3D21-203ENST00000480549 USP1O94782 785 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 SMARCB1Q12824 385 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 FRG1Q14331 258 aaKnown RBP17.01■□□□□ 0.31
SH3D21-203ENST00000480549 PRPSAP1Q14558 356 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 TRIP4Q15650 581 aaPredicted RBP17.01■□□□□ 0.31
SH3D21-203ENST00000480549 ZNF669Q96BR6 464 aaPredicted RBP17.01■□□□□ 0.31
SH3D21-203ENST00000480549 FCRL5Q96RD9 977 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 TLR8Q9NR97 1041 aaKnown RBP17.01■□□□□ 0.31
SH3D21-203ENST00000480549 HTR3EA5X5Y0 456 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 ADAM12O43184 909 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 NPY2RP49146 381 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 SMAD1Q15797 465 aaKnown RBP17.01■□□□□ 0.31
SH3D21-203ENST00000480549 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 SLC13A1Q9BZW2 595 aa17.01■□□□□ 0.31
SH3D21-203ENST00000480549 GLOD4Q9HC38 313 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms