RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 INO80DQ53TQ3 878 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 RNASEH2BQ5TBB1 312 aaKnown RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 IZUMO3Q5VZ72 239 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 KCTD11Q693B1 232 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 RETSATQ6NUM9 610 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 KDELC1Q6UW63 502 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 Q6ZS52 159 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 PID1Q7Z2X4 250 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 MAATS1Q7Z4T9 603 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 GSPT2Q8IYD1 628 aaKnown RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 GJD3Q8N144 294 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 CHST14Q8NCH0 376 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 NSMCE1Q8WV22 266 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 ERLEC1Q96DZ1 483 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 PWWP2AQ96N64 755 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 FCRL5Q96RD9 977 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 VAT1Q99536 393 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 SEMA3CQ99985 751 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 ERP44Q9BS26 406 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 TMEM245Q9H330 911 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 ETNK1Q9HBU6 452 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 NOD2Q9HC29 1040 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 EPB41L5Q9HCM4 733 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 GDF3Q9NR23 364 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 CACNA2D2Q9NY47 1150 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 PAK5Q9P286 719 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 NDRG2Q9UN36 371 aaKnown RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 STARD13Q9Y3M8 1113 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 MTF2Q9Y483 593 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 FARP1Q9Y4F1 1045 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 TRIOO75962 3097 aa9.09□□□□□ -0.95
NUDCD3-208ENST00000480209 CTIFO43310 598 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ADAM23O75077 832 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 RNF40O75150 1001 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PIGNO95427 931 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ATP5BP06576 529 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CTSLP07711 333 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 GLULP15104 373 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 COL9A1P20849 921 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 TIE1P35590 1138 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ADCY8P40145 1251 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CD86P42081 329 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 GRIA1P42261 906 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 MAGEA6P43360 314 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CHRNA4P43681 627 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CARSP49589 748 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CCNHP51946 323 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 METAP1P53582 386 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ITGA8P53708 1063 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 GEMIN4P57678 1058 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ITKQ08881 620 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 TRAF2Q12933 501 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ENPP2Q13822 863 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PARP6Q2NL67 630 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 GLE1Q53GS7 698 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ITPRIPL1Q6GPH6 555 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 HIBCHQ6NVY1 386 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 NCEH1Q6PIU2 408 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 DPY19L3Q6ZPD9 716 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 SUGP1Q8IWZ8 645 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 AGGF1Q8N302 714 aaeCLIP9.08□□□□□ -0.963e-8■■□□□ 12.7
NUDCD3-208ENST00000480209 ZNF513Q8N8E2 541 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 NAT8LQ8N9F0 302 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 MYRIPQ8NFW9 859 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 OR2AP1Q8NGE2 309 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 OR2A12Q8NGT7 310 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 FAM3CQ92520 227 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PRCCQ92733 491 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PTPRN2Q92932 1015 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ISG20Q96AZ6 181 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 MSANTD3Q96H12 275 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 SNF8Q96H20 258 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 SMIM14Q96QK8 99 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 NUDCD1Q96RS6 583 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 APOL2Q9BQE5 337 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 WDR83Q9BRX9 315 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 FOXQ1Q9C009 403 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CEP44Q9C0F1 390 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 POLR1EQ9GZS1 481 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 RAB17Q9H0T7 212 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 SLC25A51Q9H1U9 297 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 ZDHHC18Q9NUE0 388 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 EVLQ9UI08 416 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 STON1Q9Y6Q2 735 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 PLXNA2O75051 1894 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 DOCK9Q9BZ29 2069 aa9.08□□□□□ -0.96
NUDCD3-208ENST00000480209 NUMA1Q14980 2115 aa9.07□□□□□ -0.96
NUDCD3-208ENST00000480209 BNIP3LO60238 219 aa9.07□□□□□ -0.96
NUDCD3-208ENST00000480209 SIN3BO75182 1162 aa9.07□□□□□ -0.96
NUDCD3-208ENST00000480209 USP12O75317 370 aa9.07□□□□□ -0.96
NUDCD3-208ENST00000480209 PMPCBO75439 489 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms