RNA–Protein interactions for RNA: ENST00000478970.6

LDHA-209, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-209ENST00000478970 LNP1A1A4G5 178 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 TMEM110-MUSTN1A8MSY1 372 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 LATO43561 262 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 PSTPIP1O43586 416 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 AP1G1O43747 822 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 SPOPO43791 374 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 PALMO75781 387 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 MX2P20592 715 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 SUOXP51687 545 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 AFF3P51826 1226 aaKnown RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 RACK1P63244 317 aaKnown RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 PUM1Q14671 1186 aaKnown RBP eCLIP16.01■□□□□ 0.153e-25■□□□□ 9.9
LDHA-209ENST00000478970 SF3A2Q15428 464 aaKnown RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 CYTH1Q15438 398 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TEAD4Q15561 434 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 ANKRD20A8PQ5CZ79 823 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 ZNF805Q5CZA5 627 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 RALGPS1Q5JS13 557 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 PIP5KL1Q5T9C9 394 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 ATPAF2Q8N5M1 289 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 FATE1Q969F0 183 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 SKA1Q96BD8 255 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 TUBGCP5Q96RT8 1024 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 EDEM2Q9BV94 578 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 CINPQ9BW66 212 aaPredicted RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 ZDHHC6Q9H6R6 413 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 DLL3Q9NYJ7 618 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 DKK3Q9UBP4 350 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 SEPT3Q9UH03 358 aa16.01■□□□□ 0.15
LDHA-209ENST00000478970 EIF2B4Q9UI10 523 aaKnown RBP16.01■□□□□ 0.15
LDHA-209ENST00000478970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
LDHA-209ENST00000478970 PCDH15Q96QU1 1955 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ATXN2Q99700 1313 aaKnown RBP16■□□□□ 0.15
LDHA-209ENST00000478970 J3KR12 359 aa16■□□□□ 0.15
LDHA-209ENST00000478970 KRIT1O00522 736 aa16■□□□□ 0.15
LDHA-209ENST00000478970 SLC30A4O14863 429 aa16■□□□□ 0.15
LDHA-209ENST00000478970 PJA2O43164 708 aa16■□□□□ 0.15
LDHA-209ENST00000478970 RNGTTO60942 597 aaKnown RBP16■□□□□ 0.15
LDHA-209ENST00000478970 FSBPO95073 299 aa16■□□□□ 0.15
LDHA-209ENST00000478970 CFIP05156 583 aa16■□□□□ 0.15
LDHA-209ENST00000478970 IGHV4-34P06331 123 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
LDHA-209ENST00000478970 GJC1P36383 396 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ID4P47928 161 aa16■□□□□ 0.15
LDHA-209ENST00000478970 GRIA4P48058 902 aa16■□□□□ 0.15
LDHA-209ENST00000478970 VAV2P52735 878 aa16■□□□□ 0.15
LDHA-209ENST00000478970 IRX4P78413 519 aa16■□□□□ 0.15
LDHA-209ENST00000478970 CCDC6Q16204 474 aa16■□□□□ 0.15
LDHA-209ENST00000478970 IFI16Q16666 785 aaKnown RBP16■□□□□ 0.15
LDHA-209ENST00000478970 ATP13A4Q4VNC1 1196 aa16■□□□□ 0.15
LDHA-209ENST00000478970 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
LDHA-209ENST00000478970 FBXL19Q6PCT2 694 aa16■□□□□ 0.15
LDHA-209ENST00000478970 IL27RAQ6UWB1 636 aa16■□□□□ 0.15
LDHA-209ENST00000478970 RAD9BQ6WBX8 426 aa16■□□□□ 0.15
LDHA-209ENST00000478970 PRPF39Q86UA1 669 aaKnown RBP16■□□□□ 0.15
LDHA-209ENST00000478970 TMEM139Q8IV31 216 aa16■□□□□ 0.15
LDHA-209ENST00000478970 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
LDHA-209ENST00000478970 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
LDHA-209ENST00000478970 SNX19Q92543 992 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ARRDC3Q96B67 414 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ZNF641Q96N77 438 aaPredicted RBP16■□□□□ 0.15
LDHA-209ENST00000478970 PSKH2Q96QS6 385 aa16■□□□□ 0.15
LDHA-209ENST00000478970 TMEM9BQ9NQ34 198 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ETNK2Q9NVF9 386 aa16■□□□□ 0.15
LDHA-209ENST00000478970 LHX3Q9UBR4 397 aa16■□□□□ 0.15
LDHA-209ENST00000478970 AMACRQ9UHK6 382 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ACTL7AQ9Y615 435 aa16■□□□□ 0.15
LDHA-209ENST00000478970 ALG6Q9Y672 507 aa16■□□□□ 0.15
LDHA-209ENST00000478970 SHROOM3Q8TF72 1996 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 A0A1W2PQ67 120 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 LRRD1A4D1F6 860 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 FAM47DPA6NHR8 397 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 PATE3B3GLJ2 98 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 ARHGAP33O14559 1287 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 BUB1BO60566 1050 aaPredicted RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 MAFKO60675 156 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 CD48P09326 243 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 ADRB3P13945 408 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 COMTP21964 271 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 GALNT2Q10471 571 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 LBRQ14739 615 aaKnown RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 SETMARQ53H47 684 aaPredicted RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 NCBP2-AS2Q69YL0 99 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 GDPD4Q6W3E5 623 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 ZCCHC9Q8N567 271 aaKnown RBP15.99■□□□□ 0.15
LDHA-209ENST00000478970 SPC24Q8NBT2 197 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 PCDH19Q8TAB3 1148 aa15.99■□□□□ 0.15
LDHA-209ENST00000478970 FAM174AQ8TBP5 190 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms