RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 K7ESM1 405 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 SPINT1O43278 529 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 FLNBO75369 2602 aaKnown RBP17■□□□□ 0.31
TRIM13-208ENST00000478111 NEBLO76041 1014 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 MMP8P22894 467 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 ABL2P42684 1182 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 FMO1Q01740 532 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 TBC1D25Q3MII6 688 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 LRRC69Q6ZNQ3 347 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 PTAR1Q7Z6K3 402 aaPredicted RBP17■□□□□ 0.31
TRIM13-208ENST00000478111 PHLDB2Q86SQ0 1253 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 MSANTD4Q8NCY6 345 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 JOSD2Q8TAC2 188 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 RXFP2Q8WXD0 754 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 ARHGEF2Q92974 986 aaKnown RBP17■□□□□ 0.31
TRIM13-208ENST00000478111 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
TRIM13-208ENST00000478111 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
TRIM13-208ENST00000478111 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 OSBPL2Q9H1P3 480 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 DNAJC28Q9NX36 388 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 GGT7Q9UJ14 662 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 TENM4Q6N022 2769 aa17■□□□□ 0.31
TRIM13-208ENST00000478111 IGLON5A6NGN9 336 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 C2CD4BA6NLJ0 364 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 RRP8O43159 456 aaKnown RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 GJB6O95452 261 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 CSF2P04141 144 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 GP1BAP07359 652 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 NME1P15531 152 aaKnown RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 EEF1GP26641 437 aaKnown RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 ACTN2P35609 894 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 HNRNPKP61978 463 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 CDR2Q01850 454 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 CDO1Q16878 200 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 HS1BP3Q53T59 392 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 ZNF677Q86XU0 584 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 ZNF548Q8NEK5 533 aaPredicted RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 BAP1Q92560 729 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 CENPIQ92674 756 aaPredicted RBP16.99■□□□□ 0.31
TRIM13-208ENST00000478111 RETREG1Q9H6L5 497 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 TMEM248Q9NWD8 314 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
TRIM13-208ENST00000478111 NEMP2A6NFY4 417 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 TSPAN6O43657 245 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 GFPT2O94808 682 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 LRIG2O94898 1065 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 ALPPL2P10696 532 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 RHOQP17081 205 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 PTPN9P43378 593 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 RABIFP47224 123 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 MAPKAPK2P49137 400 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 KLK7P49862 253 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 JAM2P57087 298 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 PFN3P60673 137 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 TLE3Q04726 772 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 PTP4A2Q12974 167 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 ZNF805Q5CZA5 627 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 CCDC185Q8N715 623 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 OR6K2Q8NGY2 324 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 SLC30A5Q8TAD4 765 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 ASB12Q8WXK4 309 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 DUSP23Q9BVJ7 150 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 TAB2Q9NYJ8 693 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 DACH1Q9UI36 760 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 ITM2BQ9Y287 266 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 CSNK1G3Q9Y6M4 447 aa16.98■□□□□ 0.31
TRIM13-208ENST00000478111 FPGTO14772 594 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 AREL1O15033 823 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 EPHB6O15197 1021 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 GSRP00390 522 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PRB1P04280 392 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 UNGP13051 313 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 SDC4P31431 198 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 ETFBP38117 255 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 HDAC4P56524 1084 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 CCDC173Q0VFZ6 552 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 EIF2B5Q13144 721 aaKnown RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PDE1CQ14123 709 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 ARL13BQ3SXY8 428 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 RWDD4Q6NW29 188 aaKnown RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 LEKR1Q6ZMV7 388 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 STRADAQ7RTN6 431 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PARGQ86W56 976 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 SPACA3Q8IXA5 215 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 OR2AP1Q8NGE2 309 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 RAB7BQ96AH8 199 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 FCRL3Q96P31 734 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 C11orf70Q9BRQ4 267 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 MAGEH1Q9H213 219 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 NOL6Q9H6R4 1146 aaKnown RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 USP29Q9HBJ7 922 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PNMA8BQ9ULN7 279 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-208ENST00000478111 PIEZO2Q9H5I5 2752 aa16.97■□□□□ 0.31
TRIM13-208ENST00000478111 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms