RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CHST14Q8NCH0 376 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 OR52K2Q8NGK3 314 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 TAS1R2Q8TE23 839 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 DNAI2Q9GZS0 605 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 NIF3L1Q9GZT8 377 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 DYRK4Q9NR20 520 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 KBTBD4Q9NVX7 518 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 PILRAQ9UKJ1 303 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 GPR34Q9UPC5 381 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 DOLKQ9UPQ8 538 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 HS3ST2Q9Y278 367 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 TLR6Q9Y2C9 796 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 SRPRBQ9Y5M8 271 aaKnown RBP7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 B3GALT1Q9Y5Z6 326 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 K7ERQ8 282 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 M0QYT0 321 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 MAP3K7O43318 606 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 B4GAT1O43505 415 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 AP1G1O43747 822 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 LEFTY1O75610 366 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 MOCS2O96007 188 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PDGFAP04085 211 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 ALPIP09923 528 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 SRCP12931 536 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 LCP1P13796 627 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 ADRB3P13945 408 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 EIF4A3P38919 411 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 TXLNAP40222 546 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PIK3CAP42336 1068 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 HK3P52790 923 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 THOP1P52888 689 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 YPEL5P62699 121 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 B4GALNT1Q00973 533 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 ARHGAP44Q17R89 818 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 ATP1A1-AS1Q5TC04 95 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 CNNM4Q6P4Q7 775 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 MACC1Q6ZN28 852 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 TIPARPQ7Z3E1 657 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PIM3Q86V86 326 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 ZSCAN30Q86W11 494 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 CIR1Q86X95 450 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 DENND6BQ8NEG7 585 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 UBA3Q8TBC4 463 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 DQX1Q8TE96 717 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 IRGQQ8WZA9 623 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 RNF34Q969K3 372 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 HAPLN3Q96S86 360 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PPP1R9BQ96SB3 815 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 PRMT1Q99873 361 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 DDA1Q9BW61 102 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 EDEM3Q9BZQ6 932 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 IMPG2Q9BZV3 1241 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 TNMDQ9H2S6 317 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 GPN2Q9H9Y4 310 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 RDH14Q9HBH5 336 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 CISHQ9NSE2 258 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 AKAP7Q9P0M2 348 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC25A13Q9UJS0 675 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 TSPAN16Q9UKR8 245 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 KCTD3Q9Y597 815 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 CLIC4Q9Y696 253 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 WASF2Q9Y6W5 498 aa7.46□□□□□ -1.22
SPTLC1-205ENST00000477888 IGHV5-10-1A0A0J9YXX1 117 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 LOC101059948A0A1B0GTJ6 334 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 MKRN2OSH3BPM6 223 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 H3BQV1 296 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 TOR1BO14657 336 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 SPTLC2O15270 562 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 HNRNPRO43390 633 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 SMAD6O43541 496 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 NUDT21O43809 227 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 ZNF821O75541 412 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 CD2BP2O95400 341 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 CPNE6O95741 557 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 LTFP02788 710 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 MAP4P27816 1152 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 L1CAMP32004 1257 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 IGFALSP35858 605 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 BLKP51451 505 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 NEK3P51956 506 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 NUCB2P80303 420 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 MC1RQ01726 317 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 BST2Q10589 180 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 MRPL49Q13405 166 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 EIF4EBP2Q13542 120 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 ALG11Q2TAA5 492 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 GOLGA7BQ2TAP0 167 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 ZC3H12AQ5D1E8 599 aaKnown RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 PMF1Q6P1K2 205 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 DPY19L3Q6ZPD9 716 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 CHSY1Q86X52 802 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 GKN2Q86XP6 184 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 SFTPA2Q8IWL1 248 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 UNC5BQ8IZJ1 945 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 TTC39CQ8N584 583 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms