RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RGS7P49802 495 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 STAT5BP51692 787 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GTF2A2P52657 109 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 JAM2P57087 298 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 IRF2BP2Q7Z5L9 587 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 HPS6Q86YV9 775 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 FBXW8Q8N3Y1 598 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 UBL4BQ8N7F7 174 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 TSNARE1Q96NA8 513 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DEPDC7Q96QD5 511 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SMYD3Q9H7B4 428 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 APEX2Q9UBZ4 518 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 KLQ9UEF7 1012 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC24A2Q9UI40 661 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SNX7Q9UNH6 387 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ST14Q9Y5Y6 855 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 I3L4J1 428 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 NOP56O00567 594 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 PMM2O15305 246 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 CD4P01730 458 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 UGT2B4P06133 528 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ENPEPQ07075 957 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SNTA1Q13424 505 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 SNRNP35Q16560 246 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 RSBN1Q5VWQ0 802 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DSG4Q86SJ6 1040 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 OR5H6Q8NGV6 325 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 POMGNT1Q8WZA1 660 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ANKRD60Q9BZ19 345 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DHX33Q9H6R0 707 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF221Q9UK13 617 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 TISP43B9A030 160 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 HNRNPDLO14979 420 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 RETP07949 1114 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 KRT7P08729 469 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 ADRA1DP25100 572 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 GJA5P36382 358 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 PKN2Q16513 984 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 SEL1L2Q5TEA6 688 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 KIAA0408Q6ZU52 694 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 C4orf33Q8N1A6 199 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 SNX31Q8N9S9 440 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 PIK3R3Q92569 461 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 DLG3Q92796 817 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 PORCNQ9H237 461 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 GMEB2Q9UKD1 530 aa12.82□□□□□ -0.36
RTFDC1-207ENST00000477573 GCAP28676 217 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 SOX5P35711 763 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 OPRL1P41146 370 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 EPHB1P54762 984 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 SOX10P56693 466 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 KRT17Q04695 432 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 SCRN3Q0VDG4 424 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 RAB39AQ14964 217 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 CCNG2Q16589 344 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 LY6KQ17RY6 165 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 PSD4Q8NDX1 1056 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM80Q96HE8 168 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ZSCAN5AQ9BUG6 496 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 KCTD5Q9NXV2 234 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 FETUBQ9UGM5 382 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 PSME2Q9UL46 239 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF175Q9Y473 711 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms