RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
SEC22A-205ENST00000477063 SMG5Q9UPR3 1016 aaKnown RBP13.47□□□□□ -0.25
SEC22A-205ENST00000477063 HEATR9A2RTY3 570 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 POC1B-GALNT4F8VUJ3 575 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 PER2O15055 1255 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 TSPAN3O60637 253 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 MT-CYBP00156 380 aaPredicted RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 NRIP1P48552 1158 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 ITKQ08881 620 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 MGAT5Q09328 741 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 KBTBD12Q3ZCT8 623 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SYCP2LQ5T4T6 812 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 STXBP5Q5T5C0 1151 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 TRABD2AQ86V40 505 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 LMNTD2Q8IXW0 634 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 IPMKQ8NFU5 416 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SPATA22Q8NHS9 363 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 IRF7Q92985 503 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 ALG14Q96F25 216 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 CERS2Q96G23 380 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 SRPK1Q96SB4 655 aaKnown RBP13.46□□□□□ -0.25
SEC22A-205ENST00000477063 FICDQ9BVA6 458 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 RPS6KL1Q9Y6S9 549 aa13.46□□□□□ -0.25
SEC22A-205ENST00000477063 TMEM265A0A087WTH1 108 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 CBX4O00257 560 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 INSIG1O15503 277 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 PRPF4O43172 522 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 MMP2P08253 660 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 GJA1P17302 382 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 HADHAP40939 763 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 CSKP41240 450 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 CD86P42081 329 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SLCO1A2P46721 670 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SERPINH1P50454 418 aaKnown RBP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 AP1S1P61966 158 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ARF5P84085 180 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 CDK18Q07002 472 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 NIPAL4Q0D2K0 466 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SLC1A5Q15758 541 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ANKRD20A4Q4UJ75 823 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 PDPK2PQ6A1A2 396 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 PKN3Q6P5Z2 889 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 EXOC3L1Q86VI1 746 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ARID3BQ8IVW6 561 aaPredicted RBP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 MPP5Q8N3R9 675 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SH2D3CQ8N5H7 860 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 OR52K2Q8NGK3 314 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 DCAKDQ8WVC6 231 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ISG20Q96AZ6 181 aaKnown RBP13.45□□□□□ -0.26
SEC22A-205ENST00000477063 IFT43Q96FT9 208 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SEMA3CQ99985 751 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 PLAC1Q9HBJ0 212 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 SPHK2Q9NRA0 654 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ABCB8Q9NUT2 735 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 TCAF1Q9Y4C2 921 aa13.45□□□□□ -0.26
SEC22A-205ENST00000477063 ZCWPW2A0A1B0GU75 182 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 SMIM23A6NLE4 172 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 PMPCBO75439 489 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 NDST3O95803 873 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 SNRPAP09012 282 aaKnown RBP13.44□□□□□ -0.26
SEC22A-205ENST00000477063 CEBPBP17676 345 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 KRT15P19012 456 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 FSHRP23945 695 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 POLD2P49005 469 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
SEC22A-205ENST00000477063 DSC2Q02487 901 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 SPARCL1Q14515 664 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 GRM3Q14832 879 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 TMED2Q15363 201 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 CYTH1Q15438 398 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 TERF2Q15554 542 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 UGP2Q16851 508 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 PLEKHG6Q3KR16 790 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 KIAA0930Q6ICG6 404 aaPredicted RBP13.44□□□□□ -0.26
SEC22A-205ENST00000477063 TIFABQ6ZNK6 161 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 RBM23Q86U06 439 aaKnown RBP13.44□□□□□ -0.26
SEC22A-205ENST00000477063 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 PGBD5Q8N414 524 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 CALML6Q8TD86 181 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 OSCP1Q8WVF1 389 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 SGSM3Q96HU1 749 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 LMLNQ96KR4 655 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 SMC6Q96SB8 1091 aa13.44□□□□□ -0.26
SEC22A-205ENST00000477063 CPNE1Q99829 537 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms