RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TMEM9Q9P0T7 183 aa17.96■□□□□ 0.47
CCM2-207ENST00000475551 TMEM181Q9P2C4 612 aa17.96■□□□□ 0.47
CCM2-207ENST00000475551 TLK1Q9UKI8 766 aa17.96■□□□□ 0.47
CCM2-207ENST00000475551 TANC1Q9C0D5 1861 aa17.96■□□□□ 0.47
CCM2-207ENST00000475551 SNAP91O60641 907 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 EPHX2P34913 555 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 LAMTOR4Q0VGL1 99 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 MERTKQ12866 999 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 ZBTB17Q13105 803 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 HSDL1Q3SXM5 330 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 DCAF6Q58WW2 860 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 FGD3Q5JSP0 725 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 GPR107Q5VW38 600 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 ANKRD26P1Q6NSI1 321 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 SLC15A3Q8IY34 581 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 TMEM130Q8N3G9 435 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 RNF149Q8NC42 400 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 ACVR1CQ8NER5 493 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 OR52K1Q8NGK4 314 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 WNK4Q96J92 1243 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 CNDP2Q96KP4 475 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 TDRD1Q9BXT4 1180 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 UPF3AQ9H1J1 476 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 TARM1B6A8C7 271 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 XPOTO43592 962 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 STAMBPO95630 424 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 F7P08709 466 aaPredicted RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 CDH3P22223 829 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 DNAJB1P25685 340 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 ABCG1P45844 678 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 GTF2A2P52657 109 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 IFRD2Q12894 506 aaPredicted RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 GOLGA7BQ2TAP0 167 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 SLC36A3Q495N2 470 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 DHFR2Q86XF0 187 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 SCUBE3Q8IX30 993 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 HMGCLL1Q8TB92 370 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 TRUB1Q8WWH5 349 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 PGLYRP2Q96PD5 576 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 PCYT2Q99447 389 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 MPHOSPH6Q99547 160 aaKnown RBP17.95■□□□□ 0.46
CCM2-207ENST00000475551 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 SLC30A1Q9Y6M5 507 aa17.95■□□□□ 0.46
CCM2-207ENST00000475551 NPHS1O60500 1241 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 HSPA8P11142 646 aaKnown RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 GOT1P17174 413 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 CD247P20963 164 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ICAM3P32942 547 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 BMXP51813 675 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ATXN1P54253 815 aaKnown RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 FSTL1Q12841 308 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 SQLEQ14534 574 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 MXD4Q14582 209 aaPredicted RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 DGKDQ16760 1214 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 PKDCCQ504Y2 493 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 FAM45BPQ6NSW5 357 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 C8orf82Q6P1X6 216 aaPredicted RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 ZDHHC17Q8IUH5 632 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ZNF567Q8N184 647 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 OR2T34Q8NGX1 318 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 OR2T3Q8NH03 318 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 FAM45AQ8TCE6 357 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 TANKQ92844 425 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 GPR22Q99680 433 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 FAM124BQ9H5Z6 455 aaPredicted RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 LRRC4Q9HBW1 653 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 BFARQ9NZS9 450 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 VANGL2Q9ULK5 521 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 B3GNT3Q9Y2A9 372 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 SNX9Q9Y5X1 595 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ZNF839A8K0R7 811 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ACKR2O00590 384 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 MFSD11O43934 449 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 GRSF1Q12849 480 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCM2-207ENST00000475551 HACD2Q6Y1H2 254 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 TMEM26Q6ZUK4 368 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 CBR4Q8N4T8 237 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 TTC39CQ8N584 583 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 CANT1Q8WVQ1 401 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 SCYL1Q96KG9 808 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 NT5C1AQ9BXI3 368 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 ADAMTS10Q9H324 1103 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 TRPC7Q9HCX4 862 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 CCM2LQ9NUG4 571 aaPredicted RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 RCOR3Q9P2K3 495 aaPredicted RBP17.94■□□□□ 0.46
CCM2-207ENST00000475551 SLC39A10Q9ULF5 831 aa17.94■□□□□ 0.46
CCM2-207ENST00000475551 WDR90Q96KV7 1748 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 DLX3O60479 287 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 C7P10643 843 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 ARL4AP40617 200 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 RXRGP48443 463 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 BNIP3Q12983 259 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 EEF1DP3Q658K8 133 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 LRRC8EQ6NSJ5 796 aa17.93■□□□□ 0.46
CCM2-207ENST00000475551 KCNMB4Q86W47 210 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms