RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SLC17A9Q9BYT1 436 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 HSD3B7Q9H2F3 369 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 DONSONQ9NYP3 566 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 ZFR2Q9UPR6 939 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 APC2O95996 2303 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 TCRBV5S1A1TA0A578 114 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 TRABD2BA6NFA1 517 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 A6NNZ2 444 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 TSPAN6O43657 245 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 POP4O95707 220 aaKnown RBP20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 CKMT2P17540 419 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 EPHB2P29323 1055 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 ZNF805Q5CZA5 627 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 SEL1L3Q68CR1 1132 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 ACAD10Q6JQN1 1059 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 SCYL2Q6P3W7 929 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 ZNF354CQ86Y25 554 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 RTL3Q8N8U3 475 aaKnown RBP20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 MDM1Q8TC05 714 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 ARHGEF26Q96DR7 871 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 VCPIP1Q96JH7 1222 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 MCEEQ96PE7 176 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 CALN1Q9BXU9 219 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 CATSPERBQ9H7T0 1116 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 FZD3Q9NPG1 666 aa20.7■□□□□ 0.9
PDLIM4-206ENST00000474421 TDRD6O60522 2096 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 FAM149AA5PLN7 773 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 CCP110O43303 1012 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 BUB1O43683 1085 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 ATP1A3P13637 1013 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 JUPP14923 745 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 HTR7P34969 479 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 YBEYP58557 167 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 RAD51Q06609 339 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 SGCGQ13326 291 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 ZNF211Q13398 564 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 CAMK2BQ13554 666 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 PARS2Q7L3T8 475 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 MCOLN2Q8IZK6 566 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 OR13H1Q8NG92 308 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 BPIFA3Q9BQP9 254 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 ACTL7AQ9Y615 435 aa20.69■□□□□ 0.9
PDLIM4-206ENST00000474421 C16orf96A6NNT2 1141 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 SMTNL1A8MU46 457 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 KRIT1O00522 736 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 NEMP1O14524 444 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 SDC3O75056 442 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 DGKAP23743 735 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 RPL7AP62424 266 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 MYLK3Q32MK0 819 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 PARP15Q460N3 678 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 FILIP1LQ4L180 1135 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 INO80DQ53TQ3 878 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 PPP1R15BQ5SWA1 713 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 KYAT3Q6YP21 454 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 GCNT7Q6ZNI0 430 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 Q6ZSR6 202 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 PTAR1Q7Z6K3 402 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 ASB12Q8WXK4 309 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 GDAP1L1Q96MZ0 367 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 MAGEB5Q9BZ81 275 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 FZD10Q9ULW2 581 aa20.68■□□□□ 0.9
PDLIM4-206ENST00000474421 LAMA5O15230 3695 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 WASH4PA8MWX3 477 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 FGF10O15520 208 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 CREB3O43889 395 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 PAK4O96013 591 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 ALPPL2P10696 532 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 ACP1P24666 158 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 RABIFP47224 123 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 CLDN2P57739 230 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 PROX2Q3B8N5 592 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 ANO6Q4KMQ2 910 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 IRF2BP2Q7Z5L9 587 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 MARCH9Q86YJ5 346 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 PYROXD2Q8N2H3 581 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 SLC25A45Q8N413 288 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 OR6K2Q8NGY2 324 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 OR4C6Q8NH72 309 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 LENG8Q96PV6 779 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 RTN4Q9NQC3 1192 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 PARVAQ9NVD7 372 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 LHX6Q9UPM6 363 aa20.67■□□□□ 0.9
PDLIM4-206ENST00000474421 URB1O60287 2271 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 NEMP2A6NFY4 417 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 EIF3CLB5ME19 914 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 FPGTO14772 594 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 SIGLEC6O43699 453 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 PIAS2O75928 621 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 TMCC1O94876 653 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 IGSF6O95976 241 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 UGT2B4P06133 528 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 HNRNPKP61978 463 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 E2F1Q01094 437 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 CYP4F3Q08477 520 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 FGL2Q14314 439 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 GDPD4Q6W3E5 623 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 LEKR1Q6ZMV7 388 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms