RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 OR8K5Q8NH50 307 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DNAJA4Q8WW22 397 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ALG14Q96F25 216 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PGAP3Q96FM1 320 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM169Q96HH4 297 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TRNT1Q96Q11 434 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TESK2Q96S53 571 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CCM2Q9BSQ5 444 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MTG1Q9BT17 334 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 RIBC2Q9H4K1 309 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SH2D4AQ9H788 454 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 COQ10BQ9H8M1 238 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM8AQ9HCN3 771 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NPHS2Q9NP85 383 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 THAP1Q9NVV9 213 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SELENONQ9NZV5 590 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 KLHL14Q9P2G3 628 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ASH2LQ9UBL3 628 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NPFFR2Q9Y5X5 522 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 GPR45Q9Y5Y3 372 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 USP3Q9Y6I4 520 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SPACA6W5XKT8 324 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DOPEY1Q5JWR5 2465 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 VPS8Q8N3P4 1428 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 OR6C75A6NL08 312 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM210A6NLX4 147 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 LIN7AO14910 233 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CAPN5O15484 640 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ADAM20O43506 726 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 GATCO43716 136 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PHACTR2O75167 634 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MED24O75448 989 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CRCPO75575 148 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 GCATO75600 419 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SOD2P04179 222 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ALPPP05187 535 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SNRPAP09012 282 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ALPPL2P10696 532 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PRKCAP17252 672 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 RPA1P27694 616 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CD97P48960 835 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 AARSP49588 968 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PMP22Q01453 160 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PTSQ03393 145 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CEBPZQ03701 1054 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CBFBQ13951 182 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC39A14Q15043 492 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SGCAQ16586 387 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DGKDQ16760 1214 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PABPC1LQ4VXU2 614 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 C10orf120Q5SQS8 335 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DEPDC1Q5TB30 811 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM122CQ6P4D5 195 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 VHLLQ6RSH7 139 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TRMT10CQ7L0Y3 403 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 RRAGAQ7L523 313 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CCDC25Q86WR0 208 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MAP7D3Q8IWC1 876 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ETFBKMTQ8IXQ9 262 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NXPE1Q8N323 547 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 LIX1Q8N485 282 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MEIOBQ8N635 442 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 POU5F2Q8N7G0 328 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TDRD5Q8NAT2 981 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ICA1LQ8NDH6 482 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SEC14L1Q92503 715 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 RHBDF1Q96CC6 855 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 XAGE2Q96GT9 111 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 WNK4Q96J92 1243 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MAGED4Q96JG8 741 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 EGLN2Q96KS0 407 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 AGAP2Q99490 1192 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NEU1Q99519 415 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 APOL6Q9BWW8 343 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 KLHL4Q9C0H6 718 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NDEL1Q9GZM8 345 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TPK1Q9H3S4 243 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 IL26Q9NPH9 171 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 LZTFL1Q9NQ48 299 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 KLC4Q9NSK0 619 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 NRBP2Q9NSY0 501 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 COPG2Q9UBF2 871 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 LCMT1Q9UIC8 334 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CHKBQ9Y259 395 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MRPS2Q9Y399 296 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PCDHGA5Q9Y5G8 931 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CACNG2Q9Y698 323 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 COL11A2P13942 1736 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CACNA1SQ13698 1873 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 TRAV34A0A0B4J273 112 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 A0A1W2PQU0 124 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 GOLGA8KD6RF30 607 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 DNALI1O14645 258 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 VEGFDO43915 354 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PPP6R2O75170 966 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 MTX2O75431 263 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 METTL18O95568 372 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 GAS8O95995 478 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms