RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DENND5BQ6ZUT9 1274 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PIGZQ86VD9 579 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CHSY1Q86X52 802 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 FUKQ8N0W3 1084 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DEFB106AQ8N104 65 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 THEM5Q8N1Q8 247 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ARHGAP24Q8N264 748 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PQLC3Q8N755 202 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CCNYQ8ND76 341 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PCDH19Q8TAB3 1148 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 RAB3IL1Q8TBN0 382 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TCP10LQ8TDR4 215 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DENND1AQ8TEH3 1009 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DCAKDQ8WVC6 231 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 HTR3CQ8WXA8 447 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 IRGQQ8WZA9 623 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF75CPQ92670 426 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 KAT2BQ92831 832 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 RNF34Q969K3 372 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 STAMBPL1Q96FJ0 436 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SMARCD1Q96GM5 515 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 UROC1Q96N76 676 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC6A18Q96N87 628 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TSNARE1Q96NA8 513 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ZMAT2Q96NC0 199 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CSPG4P5Q96PW8 444 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 VAT1Q99536 393 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 EBNA1BP2Q99848 306 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SYT15Q9BQS2 421 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SIKE1Q9BRV8 207 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DHRS4Q9BTZ2 278 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TSSK1BQ9BXA7 367 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PRDM14Q9GZV8 571 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DPEP3Q9H4B8 488 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CNGB3Q9NQW8 809 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DDX43Q9NXZ2 648 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 KLHL8Q9P2G9 620 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ZFP69BQ9UJL9 534 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 MID2Q9UJV3 735 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TCFL5Q9UL49 500 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CDH9Q9ULB4 789 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 FZD10Q9ULW2 581 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 YBX2Q9Y2T7 364 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 GIT1Q9Y2X7 761 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 MTO1Q9Y2Z2 717 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 HES2Q9Y543 173 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TEX264Q9Y6I9 313 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PLXNA1Q9UIW2 1896 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TRIM49D1C9J1S8 452 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RNF103O00237 685 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 DNM1LO00429 736 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 PPEF2O14830 753 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 KLF11O14901 512 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CREB3O43889 395 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TYROBPO43914 113 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 BANF1O75531 89 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RASSF9O75901 435 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 HAUS5O94927 633 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 UNC5CO95185 931 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TGDSO95455 350 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 POLBP06746 335 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RARBP10826 455 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 IMPDH2P12268 514 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 NQO1P15559 274 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CREB1P16220 341 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 PRKCHP24723 683 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ADRA1DP25100 572 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RPL10P27635 214 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 FOXN2P32314 431 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 HTR7P34969 479 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 HCAR3P49019 387 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ARFIP2P53365 341 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 PDE1BQ01064 536 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC18A2Q05940 514 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 BNIP1Q12981 228 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 NME3Q13232 169 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SEMA5AQ13591 1074 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TBCCQ15814 346 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 KBTBD12Q3ZCT8 623 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SPANXN3Q5MJ09 141 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 C6orf163Q5TEZ5 329 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 KCNT2Q6UVM3 1135 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CYS1Q717R9 158 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TBC1D1Q86TI0 1168 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RASSF3Q86WH2 238 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 FAM131BQ86XD5 332 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 BANPQ8N9N5 519 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC7A14Q8TBB6 771 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CCDC110Q8TBZ0 833 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ACMSDQ8TDX5 336 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 PPP4R1Q8TF05 950 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RNF139Q8WU17 664 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 KBTBD7Q8WVZ9 684 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 INPP5DQ92835 1189 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 NTAN1Q96AB6 310 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TTC17Q96AE7 1141 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ERP27Q96DN0 273 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SENP8Q96LD8 212 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms