RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 EPN1Q9Y6I3 576 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF335Q9H4Z2 1342 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-212ENST00000473961 A0A1W2PRQ8 180 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 TCRBV7S3A2A0A539 114 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 TCRBV5S1A1TA0A578 114 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 AGAP14A8MT82 685 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 TARM1B6A8C7 271 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 SCAMP1O15126 338 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 INPPL1O15357 1258 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 TGFB1I1O43294 461 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 PAGE4O60829 102 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 NDUFS3O75489 264 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 CYP2D6P10635 497 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 KRT10P13645 584 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 RRM1P23921 792 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 EIF2DP41214 584 aaKnown RBP4.48□□□□□ -1.69
BRCA1-212ENST00000473961 RARRES1P49788 294 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 GNAQP50148 359 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 CDH8P55286 799 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 DGCR2P98153 550 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 PPP2R5BQ15173 497 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 RPE65Q16518 533 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 HECTD2Q5U5R9 776 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 NAA16Q6N069 864 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-212ENST00000473961 GPAT4Q86UL3 456 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 WDR5BQ86VZ2 330 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 FAM185AQ8N0U4 392 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 BCAS4Q8TDM0 211 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 MOAP1Q96BY2 351 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 YME1L1Q96TA2 773 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 MACROD1Q9BQ69 325 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 DUSP26Q9BV47 211 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 ACTR5Q9H9F9 607 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-212ENST00000473961 SLC35C2Q9NQQ7 365 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 ASAH2Q9NR71 780 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 HDAC6Q9UBN7 1215 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 HSPB7Q9UBY9 170 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 PCDHGB4Q9UN71 923 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 ICKQ9UPZ9 632 aa4.48□□□□□ -1.69
BRCA1-212ENST00000473961 UTYO14607 1347 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 FAM170AA1A519 330 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CCER2I3L3R5 266 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 RNMTO43148 476 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 DDAH2O95865 285 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 DNTTP04053 509 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 APOA4P06727 396 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 NR2F1P10589 423 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TMEM11P17152 192 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 MCM3P25205 808 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 GCH1P30793 250 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 ICAM3P32942 547 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 IDUAP35475 653 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 PBX3P40426 434 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 HADHAP40939 763 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 GPR12P47775 334 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 SOX2P48431 317 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CLCNKBP51801 687 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 MRPL12P52815 198 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CACNA2D1P54289 1103 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 ARSFP54793 590 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 SIM1P81133 766 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 HSF1Q00613 529 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TFAP4Q01664 338 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 LRMPQ12912 555 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 FOXI1Q12951 378 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 OLIG2Q13516 323 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 FRG1Q14331 258 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 BECN1Q14457 450 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 ALG10Q5BKT4 473 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 ALG10BQ5I7T1 473 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TTI2Q6NXR4 508 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TSSK4Q6SA08 328 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TMC8Q8IU68 726 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 WDTC1Q8N5D0 677 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 DPP10Q8N608 796 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 EXD3Q8N9H8 876 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 GDPD5Q8WTR4 605 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CLMNQ96JQ2 1002 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 ASB2Q96Q27 587 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 LBHD1Q9BQE6 289 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 TXLNGYQ9BZA5 131 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 IKZF4Q9H2S9 585 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CPNE5Q9HCH3 593 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 MRPL15Q9P015 296 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 NFKBIL1Q9UBC1 381 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 NOL7Q9UMY1 257 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 CARD8Q9Y2G2 431 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 AAR2Q9Y312 384 aaKnown RBP4.47□□□□□ -1.69
BRCA1-212ENST00000473961 FAM96BQ9Y3D0 163 aa4.47□□□□□ -1.69
BRCA1-212ENST00000473961 COL4A3Q01955 1670 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 A0A096LPK6 155 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 C17orf100A8MU93 164 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 LDLRAD4O15165 306 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 BEST1O76090 585 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 PLAUP00749 431 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 HEXAP06865 529 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CLTBP09497 229 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 RARGP13631 454 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms