RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 KRTAP16-1A8MUX0 517 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 ITGA5P08648 1049 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 CYP3A4P08684 503 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 U2AF1L5P0DN76 240 aaPredicted RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 CKMT1AP12532 417 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 MYL4P12829 197 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 GRK5P34947 590 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 LINC01547P58512 204 aaPredicted RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 U2AF1Q01081 240 aaKnown RBP eCLIP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 PKP1Q13835 747 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 AAK1Q2M2I8 961 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 SETMARQ53H47 684 aaPredicted RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 METTL7BQ6UX53 244 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 TMC8Q8IU68 726 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 TPH2Q8IWU9 490 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 TMEM217Q8N7C4 229 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 AMER3Q8N944 861 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 ANKRD52Q8NB46 1076 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 SLC22A17Q8WUG5 538 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 HDAC7Q8WUI4 952 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 RHOBTB2Q9BYZ6 727 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 FRMD8Q9BZ67 464 aaPredicted RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 PTPRHQ9HD43 1115 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 RPS10P5Q9NQ39 176 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 FAM118AQ9NWS6 357 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 PRO0461Q9UI25 63 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 HERC5Q9UII4 1024 aaKnown RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 SIX4Q9UIU6 781 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 PHTF1Q9UMS5 762 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 SYNJ2O15056 1496 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 NUP160Q12769 1436 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 DNMT1P26358 1616 aaKnown RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 ZCCHC11Q5TAX3 1644 aaKnown RBP1.98□□□□□ -2.09
CCDC39-203ENST00000473854 TTC37Q6PGP7 1564 aa1.98□□□□□ -2.09
CCDC39-203ENST00000473854 ADAMTS9Q9P2N4 1935 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 CGNL1Q0VF96 1302 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 NUP153P49790 1475 aaKnown RBP1.97□□□□□ -2.09
CCDC39-203ENST00000473854 CCDC18Q5T9S5 1454 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 A0A087WZ62 844 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 NDUFAF8A1L188 74 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 INHBAP08476 426 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 DHRS4L1P0CG22 281 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 FMO5P49326 533 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 PITX1P78337 314 aaPredicted RBP1.97□□□□□ -2.09
CCDC39-203ENST00000473854 SLC20A2Q08357 652 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ZDHHC20Q5W0Z9 365 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ANKRD40Q6AI12 368 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 SLC30A9Q6PML9 568 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 CIARTQ8N365 385 aaPredicted RBP1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ENDOVQ8N8Q3 282 aaKnown RBP1.97□□□□□ -2.09
CCDC39-203ENST00000473854 OR10V1Q8NGI7 309 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 FGFBP3Q8TAT2 258 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ZCRB1Q8TBF4 217 aaKnown RBP1.97□□□□□ -2.09
CCDC39-203ENST00000473854 LINC00479Q96M42 142 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 IFT27Q9BW83 186 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 TMEM120AQ9BXJ8 343 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 PDZD7Q9H5P4 517 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ZDHHC18Q9NUE0 388 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 TMEM51Q9NW97 253 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 CDH22Q9UJ99 828 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 ZNF180Q9UJW8 692 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 CA14Q9ULX7 337 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 NFU1Q9UMS0 254 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 PKP3Q9Y446 797 aa1.97□□□□□ -2.09
CCDC39-203ENST00000473854 EPRSP07814 1512 aaKnown RBP1.96□□□□□ -2.09
CCDC39-203ENST00000473854 NCOA2Q15596 1464 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 TCRBV7S3A2A0A539 114 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 GOLIM4O00461 696 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 CAPN9O14815 690 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 ARHGEF9O43307 516 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 ALDH1L1O75891 902 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 VNN2O95498 520 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 IGLV1-44P01699 117 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 LINC00271P0C7V0 271 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 SRGAP2BP0DMP2 458 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 HOXB9P17482 250 aaPredicted RBP1.96□□□□□ -2.1
CCDC39-203ENST00000473854 RXRAP19793 462 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 UGP2Q16851 508 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 CCNYL2Q5T2Q4 361 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 RNF220Q5VTB9 566 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 FAM69BQ5VUD6 431 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 RRAGBQ5VZM2 374 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 SLC35E4Q6ICL7 350 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 DARS2Q6PI48 645 aaKnown RBP1.96□□□□□ -2.1
CCDC39-203ENST00000473854 KIAA0408Q6ZU52 694 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 EPM2AIP1Q7L775 607 aaPredicted RBP1.96□□□□□ -2.1
CCDC39-203ENST00000473854 TMEM200AQ86VY9 491 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 RASGRP3Q8IV61 690 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 ZNF440Q8IYI8 595 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 AADATQ8N5Z0 425 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 FAM110DQ8TAY7 271 aaPredicted RBP1.96□□□□□ -2.1
CCDC39-203ENST00000473854 FAR1Q8WVX9 515 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 SNX27Q96L92 541 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 LRFN5Q96NI6 719 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 OPRPNQ99935 248 aaPredicted RBP1.96□□□□□ -2.1
CCDC39-203ENST00000473854 TRIM51Q9BSJ1 452 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 BTBD1Q9H0C5 482 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 PCDHAC1Q9H158 963 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 CLK4Q9HAZ1 481 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms