RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 NCKIPSDQ9NZQ3 722 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 TRHDEQ9UKU6 1024 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 HEMK1Q9Y5R4 338 aaPredicted RBP14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 NPHS1O60500 1241 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 PGK1P00558 417 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 LGALS2P05162 132 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 HNRNPLP14866 589 aaKnown RBP eCLIP14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 GABRB3P28472 473 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 TKTP29401 623 aaKnown RBP14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 ADRA1BP35368 520 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 NDUFV1P49821 464 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 RAB10P61026 200 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 EML3Q32P44 896 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 DCAF4L1Q3SXM0 396 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 REP15Q6BDI9 236 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 POTEHQ6S545 545 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 TOP1MTQ969P6 601 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 MAELQ96JY0 434 aaKnown RBP14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 EFHD1Q9BUP0 239 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 LRRC4Q9HBW1 653 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 SQORQ9Y6N5 450 aa14.41□□□□□ -0.1
NHLRC3-204ENST00000473371 NCAM2O15394 837 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 STMN1P16949 149 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 HDCP19113 662 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 NDST2P52849 883 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 MPP1Q00013 466 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CTBP1Q13363 440 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 FASTKQ14296 549 aaKnown RBP14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 PRPSAP1Q14558 356 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 FBXO47Q5MNV8 452 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 TSTD2Q5T7W7 516 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 LAYNQ6UX15 382 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 TRIM67Q6ZTA4 783 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 TRIM74Q86UV6 250 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 TRIM73Q86UV7 250 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 KLHL23Q8NBE8 558 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 SNRNP27Q8WVK2 155 aaKnown RBP14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 PBXIP1Q96AQ6 731 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 MRPL46Q9H2W6 279 aaKnown RBP14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 POMKQ9H5K3 350 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 OLAHQ9NV23 265 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CACNA2D2Q9NY47 1150 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CCDC167Q9P0B6 97 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 MCM3APO60318 1980 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 FAM95CA0A1B0GW59 222 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 MTSS1O43312 755 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 JCHAINP01591 159 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 SLC7A1P30825 629 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CDH15P55291 814 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 TRAP1Q12931 704 aaKnown RBP14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 UGP2Q16851 508 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 NAPEPLDQ6IQ20 393 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CNSTQ6PJW8 725 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 ZBTB49Q6ZSB9 765 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 CEP97Q8IW35 865 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 DENND6AQ8IWF6 608 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 SIX6OS1Q8N1H7 587 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 NPWQ8N729 165 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 NT5C3BQ969T7 300 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 SLCO4A1Q96BD0 722 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 HSPBAP1Q96EW2 488 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 RAD54BQ9Y620 910 aa14.4□□□□□ -0.1
NHLRC3-204ENST00000473371 PSMD12O00232 456 aaPredicted RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PLOD2O00469 737 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 MAGEB3O15480 346 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 HTRA2O43464 458 aaPredicted RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 GPC4O75487 556 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 STAMBPO95630 424 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 IMPDH2P12268 514 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ARSAP15289 507 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PSMD8P48556 350 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PRAMEP78395 509 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SULT2A1Q06520 285 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 LRP8Q14114 963 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SQLEQ14534 574 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 KCTD2Q14681 263 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ZBTB6Q15916 424 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 Q3C1V9 767 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 KLHL35Q6PF15 583 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 HFE2Q6ZVN8 426 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PIWIL4Q7Z3Z4 852 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PELI3Q8N2H9 469 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 TXNDC5Q8NBS9 432 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SPAG4Q9NPE6 437 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PRORSD1PA6NEY8 169 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 CLDN5O00501 218 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 TRIM24O15164 1050 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 UBDO15205 165 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 HNRNPCP07910 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 CKMT2P17540 419 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 RBM12BQ8IXT5 1001 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 AFAP1L2Q8N4X5 818 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SPPL2BQ8TCT7 592 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ELMO2Q96JJ3 720 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 GPR78Q96P69 363 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms