RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HSD3B7Q9H2F3 369 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 ANKRD62A6NC57 917 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 CCP110O43303 1012 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 AP1G1O43747 822 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 GSRP00390 522 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 DGKAP23743 735 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 ZNF143P52747 638 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-213ENST00000471978 SNRPD1P62314 119 aaKnown RBP22.92■■□□□ 1.26
C9orf3-213ENST00000471978 ILKQ13418 452 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 EFHC2Q5JST6 749 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 CCDC183Q5T5S1 534 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 C19orf48Q6RUI8 117 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 Q6ZSR6 202 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 ZNF354CQ86Y25 554 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 SLC22A18ASQ8N1D0 253 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 FAM174AQ8TBP5 190 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 LRIG1Q96JA1 1093 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 MCEEQ96PE7 176 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 HS3ST3A1Q9Y663 406 aa22.92■■□□□ 1.26
C9orf3-213ENST00000471978 ARID1BQ8NFD5 2236 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-213ENST00000471978 CHD5Q8TDI0 1954 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 TCRBV5S1A1TA0A578 114 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 C16orf96A6NNT2 1141 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 A6NNZ2 444 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 KRIT1O00522 736 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 TRIM38O00635 465 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 SIGLEC6O43699 453 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 KDELR3O43731 214 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 PAK4O96013 591 aaPredicted RBP22.91■■□□□ 1.26
C9orf3-213ENST00000471978 EPHB2P29323 1055 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 ZNF211Q13398 564 aaPredicted RBP22.91■■□□□ 1.26
C9orf3-213ENST00000471978 FGL2Q14314 439 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 PROX2Q3B8N5 592 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 ZNF805Q5CZA5 627 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 HES3Q5TGS1 186 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 PTAR1Q7Z6K3 402 aaPredicted RBP22.91■■□□□ 1.26
C9orf3-213ENST00000471978 OR2AP1Q8NGE2 309 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 BMFQ96LC9 184 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 UCKL1Q9NWZ5 548 aa22.91■■□□□ 1.26
C9orf3-213ENST00000471978 BUB1O43683 1085 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 POP4O95707 220 aaKnown RBP22.9■■□□□ 1.26
C9orf3-213ENST00000471978 MBD3O95983 291 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 CCDC172P0C7W6 258 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 ATP1A3P13637 1013 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 FERP16591 822 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 ACP1P24666 158 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 RPL7AP62424 266 aaKnown RBP22.9■■□□□ 1.26
C9orf3-213ENST00000471978 SGCGQ13326 291 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 MYLK3Q32MK0 819 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 HS1BP3Q53T59 392 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 DCP2Q8IU60 420 aaKnown RBP22.9■■□□□ 1.26
C9orf3-213ENST00000471978 AOPEPQ8N6M6 819 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 RTL3Q8N8U3 475 aaKnown RBP22.9■■□□□ 1.26
C9orf3-213ENST00000471978 RAB7BQ96AH8 199 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 NOL6Q9H6R4 1146 aaKnown RBP22.9■■□□□ 1.26
C9orf3-213ENST00000471978 TRPM6Q9BX84 2022 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 KNTC1P50748 2209 aa22.9■■□□□ 1.26
C9orf3-213ENST00000471978 CACNA1GO43497 2377 aa22.89■■□□□ 1.26
C9orf3-213ENST00000471978 POM121BA6NF01 834 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 ZSCAN5CA6NGD5 496 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-213ENST00000471978 IGLON5A6NGN9 336 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 NEMP1O14524 444 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 RAD51BO15315 384 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 TSPAN6O43657 245 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 CREB3O43889 395 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 UGT2B4P06133 528 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 ABL2P42684 1182 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 TYRO3Q06418 890 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 TARDBPQ13148 414 aaKnown RBP eCLIP22.89■■□□□ 1.25
C9orf3-213ENST00000471978 PPP1R15BQ5SWA1 713 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 ATXN7L2Q5T6C5 722 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-213ENST00000471978 ACAD10Q6JQN1 1059 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 DCUN1D2Q6PH85 259 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 KYAT3Q6YP21 454 aaKnown RBP22.89■■□□□ 1.25
C9orf3-213ENST00000471978 ZSCAN30Q86W11 494 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 OR4C6Q8NH72 309 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 IFT43Q96FT9 208 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 EPAS1Q99814 870 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 CNPY3Q9BT09 278 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 OSBPL1AQ9BXW6 950 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 CAAP1Q9H8G2 361 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 DNAJC28Q9NX36 388 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 FZD10Q9ULW2 581 aa22.89■■□□□ 1.25
C9orf3-213ENST00000471978 FFAR2O15552 330 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 PIAS2O75928 621 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 TMCC1O94876 653 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 AIF1P55008 147 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 ZNF542PQ5EBM4 170 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 MCOLN2Q8IZK6 566 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 VOPP1Q96AW1 172 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 KLHL32Q96NJ5 620 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 LENG8Q96PV6 779 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-213ENST00000471978 C1QTNF2Q9BXJ5 285 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 GGT7Q9UJ14 662 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 ITM2BQ9Y287 266 aa22.88■■□□□ 1.25
C9orf3-213ENST00000471978 ADAMTS20P59510 1910 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 FPGTO14772 594 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 YBEYP58557 167 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-213ENST00000471978 DAB2P98082 770 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 COL28A1Q2UY09 1125 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms