RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 AKR1B10O60218 316 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 POP4O95707 220 aaKnown RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 IGSF6O95976 241 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 TCF4P15884 667 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ITGB7P26010 798 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 IL1R2P27930 398 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 NUDT1P36639 197 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ARL4AP40617 200 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 CTSKP43235 329 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 PAPOLAP51003 745 aaKnown RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 NEK3P51956 506 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF135P52742 658 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ADKP55263 362 aaKnown RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 RAD51Q06609 339 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 SLC18A3Q16572 532 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 SETMARQ53H47 684 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 INO80DQ53TQ3 878 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 NAPEPLDQ6IQ20 393 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF564Q8TBZ8 553 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 SETD7Q8WTS6 366 aaKnown RBP15.95■□□□□ 0.14
HDAC6-218ENST00000470942 KLK6Q92876 244 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 GDAP1L1Q96MZ0 367 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 CAMK1GQ96NX5 476 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 SLC39A8Q9C0K1 460 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 LRRC19Q9H756 370 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 CTTNBP2NLQ9P2B4 639 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 PCDHB9Q9Y5E1 797 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 TRPM6Q9BX84 2022 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 CABIN1Q9Y6J0 2220 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 SPAARA0A1B0GVQ0 90 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 H0Y8X5 98 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 J3KR12 359 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 DFFAO00273 331 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 SLC31A1O15431 190 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 WNT1P04628 370 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 UGT2B4P06133 528 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 H2AFZP0C0S5 128 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF883P0CG24 379 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 RARAP10276 462 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 ADRB3P13945 408 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 HCAR3P49019 387 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-218ENST00000470942 STAT4Q14765 748 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 SUZ12Q15022 739 aaKnown RBP15.94■□□□□ 0.14
HDAC6-218ENST00000470942 NEK5Q6P3R8 708 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 H2AFVQ71UI9 128 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 PARS2Q7L3T8 475 aaKnown RBP15.94■□□□□ 0.14
HDAC6-218ENST00000470942 HORMAD1Q86X24 394 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 NAXDQ8IW45 347 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 NIPA2Q8N8Q9 360 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 CTNNBL1Q8WYA6 563 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-218ENST00000470942 LRIG1Q96JA1 1093 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 KLHL32Q96NJ5 620 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 ABHD10Q9NUJ1 306 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC6-218ENST00000470942 NENFQ9UMX5 172 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 DMTF1Q9Y222 760 aa15.94■□□□□ 0.14
HDAC6-218ENST00000470942 SSU72P8A0A1W2PR75 194 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 A0A1W2PR77 199 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 C16orf96A6NNT2 1141 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 PRAMEF26H0Y7S4 382 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 TLR4O00206 839 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 PRAMEF11O60813 436 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 MFAP3LO75121 409 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 PRLRP16471 622 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 AMPD1P23109 780 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 CCT8P50990 548 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 SIM1P81133 766 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-218ENST00000470942 HNRNPDQ14103 355 aaKnown RBP15.93■□□□□ 0.14
HDAC6-218ENST00000470942 CYTH1Q15438 398 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 DPYSL2Q16555 572 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 HADHQ16836 314 aaKnown RBP15.93■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF423Q2M1K9 1284 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF805Q5CZA5 627 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 PRAMEF14Q5SWL7 426 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 TXNRD3NBQ6F5E7 133 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 GDPD4Q6W3E5 623 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 FEM1CQ96JP0 617 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 EXOC2Q96KP1 924 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 CCDC42Q96M95 316 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 CHP1Q99653 195 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 MYOCQ99972 504 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 OSBPL1AQ9BXW6 950 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 PACSIN1Q9BY11 444 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 SP110Q9HB58 689 aa15.93■□□□□ 0.14
HDAC6-218ENST00000470942 AKR1B15C9JRZ8 316 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-218ENST00000470942 NEMP1O14524 444 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 DFNA5O60443 496 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 GJC1P36383 396 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 FAM193AP78312 1265 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 IL9RQ01113 521 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 FOXC1Q12948 553 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 DPYSQ14117 519 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 KRT81Q14533 505 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 TRIP6Q15654 476 aaKnown RBP15.92■□□□□ 0.14
HDAC6-218ENST00000470942 ASTE1Q2TB18 679 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-218ENST00000470942 SEL1L3Q68CR1 1132 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 POLNQ7Z5Q5 900 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 CNGA4Q8IV77 575 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms