RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 KDELR3O43731 214 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 RFPL3O75679 317 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 PCDH8O95206 1070 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 LDOC1O95751 146 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-208ENST00000469802 C1SP09871 688 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 CCDC172P0C7W6 258 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 AKT2P31751 481 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 DNA2P51530 1060 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 OGDHQ02218 1023 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 DNAJC3Q13217 504 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 FGL2Q14314 439 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 POLD3Q15054 466 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-208ENST00000469802 EFHC2Q5JST6 749 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 ACAD10Q6JQN1 1059 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 MARCH9Q86YJ5 346 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 SLC22A18ASQ8N1D0 253 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 OR13H1Q8NG92 308 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 OR6K2Q8NGY2 324 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 TAS2R14Q9NYV8 317 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 FZD10Q9ULW2 581 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 LRP4O75096 1905 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 COL27A1Q8IZC6 1860 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 ZSCAN5CA6NGD5 496 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 SDC3O75056 442 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 CDK4P11802 303 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 EPHB2P29323 1055 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 GKP32189 559 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 ABL2P42684 1182 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 RPS21P63220 83 aaKnown RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 PROX2Q3B8N5 592 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 ZNF805Q5CZA5 627 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 FBXL19Q6PCT2 694 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 KYAT3Q6YP21 454 aaKnown RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 FAM174AQ8TBP5 190 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 MDM1Q8TC05 714 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 RAB7BQ96AH8 199 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 VCPIP1Q96JH7 1222 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 CCDC86Q9H6F5 360 aaKnown RBP16.57■□□□□ 0.24
COL9A3-208ENST00000469802 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 CELSR3Q9NYQ7 3312 aa16.57■□□□□ 0.24
COL9A3-208ENST00000469802 FAM149AA5PLN7 773 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 LRRC53A6NM62 1247 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 C16orf96A6NNT2 1141 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 A6NNZ2 444 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 TMCC1O94876 653 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 CLDN2P57739 230 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 YBEYP58557 167 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-208ENST00000469802 SNRPD1P62314 119 aaKnown RBP16.56■□□□□ 0.24
COL9A3-208ENST00000469802 MAMLD1Q13495 774 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 CCDC157Q569K6 752 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 PPP1R2P3Q6NXS1 205 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 UMODL1-AS1Q8N2C9 162 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 SLC25A45Q8N413 288 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 CASKIN2Q8WXE0 1202 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 IFT43Q96FT9 208 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 BMFQ96LC9 184 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-208ENST00000469802 EPAS1Q99814 870 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 C1QTNF2Q9BXJ5 285 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 OSBPL1AQ9BXW6 950 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 SLC17A9Q9BYT1 436 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 TTYH3Q9C0H2 523 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 KLC2Q9H0B6 622 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 HS3ST3A1Q9Y663 406 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 NBEAQ8NFP9 2946 aa16.56■□□□□ 0.24
COL9A3-208ENST00000469802 A0A1B0GTH6 734 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 A0A1W2PQC6 194 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 TRIM38O00635 465 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 AREL1O15033 823 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 RAD51BO15315 384 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 FGF10O15520 208 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-208ENST00000469802 TSPAN6O43657 245 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 POP4O95707 220 aaKnown RBP16.55■□□□□ 0.24
COL9A3-208ENST00000469802 UGT2B4P06133 528 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 GIMD1P0DJR0 217 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 HTR7P34969 479 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 PRKCIP41743 596 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 ILKQ13418 452 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 SERINC3Q13530 473 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 MYLK3Q32MK0 819 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 PARP15Q460N3 678 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 INO80DQ53TQ3 878 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-208ENST00000469802 ATXN7L2Q5T6C5 722 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-208ENST00000469802 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 DCUN1D2Q6PH85 259 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 LEKR1Q6ZMV7 388 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 ASB12Q8WXK4 309 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 FEM1CQ96JP0 617 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 FUCA2Q9BTY2 467 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 CALN1Q9BXU9 219 aa16.55■□□□□ 0.24
COL9A3-208ENST00000469802 PDFQ9HBH1 243 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms