RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 K7EM74 188 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 MTSS1O43312 755 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ACSL4O60488 711 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PPFIA2O75334 1257 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ASS1P00966 412 aaKnown RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CALCAP01258 141 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 HLA-DRAP01903 254 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ALBP02768 609 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CTSLP07711 333 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CELA2BP08218 269 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ITGA2BP08514 1039 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 NR1D1P20393 614 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ST8SIA6P61647 398 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ASIC1P78348 528 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 INCA1Q0VD86 236 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 EIF2B5Q13144 721 aaKnown RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ALCAMQ13740 583 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 NCAPHQ15003 741 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 TCEA2Q15560 299 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF284Q2VY69 593 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ZACNQ401N2 412 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PIP5KL1Q5T9C9 394 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 BSPRYQ5W0U4 402 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SEL1L3Q68CR1 1132 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PM20D1Q6GTS8 502 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 TREML4Q6UXN2 200 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 Q6ZSR6 202 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CHSY3Q70JA7 882 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 TMPRSS9Q7Z410 1059 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 VN1R5Q7Z5H4 357 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 C14orf80Q86SX3 495 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 UNC93AQ86WB7 457 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 TRIM69Q86WT6 500 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CIR1Q86X95 450 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SFTPA2Q8IWL1 248 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SLC35F3Q8IY50 421 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 FBXO39Q8N4B4 442 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ARL14Q8N4G2 192 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SLC4A11Q8NBS3 891 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF548Q8NEK5 533 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CLEC4CQ8WTT0 213 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 BTBD6Q96KE9 485 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 NT5C1AQ9BXI3 368 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SLC12A9Q9BXP2 914 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CEP44Q9C0F1 390 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CLEC4MQ9H2X3 399 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SYNDIG1Q9H7V2 258 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 KIAA1586Q9HCI6 787 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 EPB41L5Q9HCM4 733 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PNPLA8Q9NP80 782 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PISDQ9UG56 409 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 STRIP2Q9ULQ0 834 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 SETD2Q9BYW2 2564 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 FBN2P35556 2912 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 MED13LQ71F56 2210 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 PRAMEF33A0A0G2JMD5 474 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ENO4A6NNW6 628 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 C9orf172C9J069 976 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 M0R082 166 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 NTN3O00634 580 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 PLD2O14939 933 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 EXOC3O60645 756 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ZBED1O96006 694 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 B3GALT4O96024 378 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 IGLV3-27P01718 113 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ASLP04424 464 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 FYNP06241 537 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 CASRP41180 1078 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 STAT6P42226 847 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 HARS2P49590 506 aaKnown RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 IRAK1P51617 712 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 RAD23BP54727 409 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 MLLT10P55197 1068 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 CCL7P80098 99 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ECT2LQ008S8 904 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 CEBPZQ03701 1054 aaKnown RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 PPP3CAQ08209 521 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 OVGP1Q12889 678 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 E2F5Q15329 346 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 SGSM1Q2NKQ1 1148 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 DCAF6Q58WW2 860 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 MANEAQ5SRI9 462 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ZCCHC8Q6NZY4 707 aaKnown RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 RAB11FIP2Q7L804 512 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ABI3BPQ7Z7G0 1075 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 TADA2BQ86TJ2 420 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 DTX1Q86Y01 620 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 CCDC65Q8IXS2 484 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 CHST14Q8NCH0 376 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF417Q8TAU3 575 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 UBA3Q8TBC4 463 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 LMX1AQ8TE12 382 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 SEMA4DQ92854 862 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 USP7Q93009 1102 aa5.42□□□□□ -1.54
PTPN4-209ENST00000469511 FUBP1Q96AE4 644 aaKnown RBP5.42□□□□□ -1.54
PTPN4-209ENST00000469511 MIB2Q96AX9 1013 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms