RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NEMP1O14524 444 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 LEFTY1O75610 366 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CD2BP2O95400 341 aaKnown RBP10.43□□□□□ -0.74
HDAC3-203ENST00000467533 GLB1P16278 677 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 IGFALSP35858 605 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 VAMP7P51809 220 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 COPB1P53618 953 aaKnown RBP10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CENPCQ03188 943 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CEBPZQ03701 1054 aaKnown RBP10.43□□□□□ -0.74
HDAC3-203ENST00000467533 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 C1orf220Q5T0J3 134 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 C16orf46Q6P387 395 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 LVRNQ6Q4G3 990 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 ASB18Q6ZVZ8 466 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 UNC13DQ70J99 1090 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 TAC4Q86UU9 113 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 HID1Q8IV36 788 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 RCBTB1Q8NDN9 531 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CCDC112Q8NEF3 446 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CLEC4CQ8WTT0 213 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 BTN2A3PQ96KV6 586 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 FEM1AQ9BSK4 669 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 EDEM3Q9BZQ6 932 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 INTS2Q9H0H0 1204 aaKnown RBP10.43□□□□□ -0.74
HDAC3-203ENST00000467533 TNKS2Q9H2K2 1166 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 KBTBD4Q9NVX7 518 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 DONSONQ9NYP3 566 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 APPL1Q9UKG1 709 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 PCDHGA3Q9Y5H0 932 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 CHD5Q8TDI0 1954 aa10.43□□□□□ -0.74
HDAC3-203ENST00000467533 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-203ENST00000467533 K7ERQ8 282 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 AP1G1O43747 822 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 NR3C1P04150 777 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 PDCP20941 246 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 RRM1P23921 792 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
HDAC3-203ENST00000467533 HK3P52790 923 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 YPEL5P62699 121 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ARHGEF7Q14155 803 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 CERCAMQ5T4B2 595 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ATP1A1-AS1Q5TC04 95 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 TCTN3Q6NUS6 607 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 C22orf39Q6P5X5 142 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 PARS2Q7L3T8 475 aaKnown RBP10.42□□□□□ -0.74
HDAC3-203ENST00000467533 RD3Q7Z3Z2 195 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 PIM3Q86V86 326 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 VPS36Q86VN1 386 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 CCDC13Q8IYE1 715 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ATP6V0D2Q8N8Y2 350 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 OR52K2Q8NGK3 314 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 PDCD6IPQ8WUM4 868 aaKnown RBP10.42□□□□□ -0.74
HDAC3-203ENST00000467533 STARD8Q92502 1023 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ART4Q93070 314 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 FAM149B1Q96BN6 582 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 DHX58Q96C10 678 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ALG14Q96F25 216 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 EFHD1Q9BUP0 239 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 C1QTNF2Q9BXJ5 285 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 MIS12Q9H081 205 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 MUC3BQ9H195 1237 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 RDH14Q9HBH5 336 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 DMAC2Q9NW81 257 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 HS3ST2Q9Y278 367 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 ITM2BQ9Y287 266 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 FRMD4BQ9Y2L6 1034 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 B3GALT1Q9Y5Z6 326 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 NF1P21359 2839 aa10.42□□□□□ -0.74
HDAC3-203ENST00000467533 F8P00451 2351 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 HGSO14964 777 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 SNAP91O60641 907 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 EIF5BO60841 1220 aaKnown RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 RASGRP1O95267 797 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 CPNE6O95741 557 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 MT-CO1P00395 513 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 FGF3P11487 239 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 PNLIPP16233 465 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 TCN2P20062 427 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 CASP1P29466 404 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 L1CAMP32004 1257 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 KRT83P78385 493 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 MC1RQ01726 317 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 PPP3CAQ08209 521 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 ALG11Q2TAA5 492 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 EIF2S3LQ2VIR3 472 aaKnown RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 AMZ1Q400G9 498 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 ZC3H12AQ5D1E8 599 aaKnown RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 GPR156Q8NFN8 814 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 TSACCQ96A04 125 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 CCDC74BQ96LY2 380 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 RPRD1AQ96P16 312 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-203ENST00000467533 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 CUEDC2Q9H467 287 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 SLC12A6Q9UHW9 1150 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 KCTD3Q9Y597 815 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
HDAC3-203ENST00000467533 ESPL1Q14674 2120 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms