RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RASSF2P50749 326 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TMPRSS3P57727 454 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 SELENOVP59797 346 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 ROR1Q01973 937 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 CUL4BQ13620 913 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 SMC1AQ14683 1233 aaKnown RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 POSTNQ15063 836 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 WASHC2DQ5SRD0 308 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 KIAA1161Q6NSJ0 714 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 SLC16A12Q6ZSM3 486 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 FBXL14Q8N1E6 418 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 SCAIQ8N9R8 606 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 KDM1BQ8NB78 822 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 ZNF622Q969S3 477 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS50-209ENST00000467326 MIB2Q96AX9 1013 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TBC1D20Q96BZ9 403 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 CCDC34Q96HJ3 373 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 THOC3Q96J01 351 aaKnown RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 LMAN2LQ9H0V9 348 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 CATSPERBQ9H7T0 1116 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 PRKRIP1Q9H875 184 aaPredicted RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 SMYD2Q9NRG4 433 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 THAP1Q9NVV9 213 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 ARGLU1Q9NWB6 273 aaPredicted RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 MAGED1Q9Y5V3 778 aaPredicted RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 SAC3D1A6NKF1 404 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CLGNO14967 610 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 IRAK2O43187 625 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 METTL18O95568 372 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 DDAH2O95865 285 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CD4P01730 458 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 TK1P04183 234 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CYP1A2P05177 515 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 T-ENOLP0DO92 83 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 FCGR2AP12318 317 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CPA1P15085 419 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CHRNB2P17787 502 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 PRKCHP24723 683 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 PSMA3P25788 255 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 AVPR2P30518 371 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CLCNKBP51801 687 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 KRT83P78385 493 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 ROR2Q01974 943 aaKnown RBP4.02□□□□□ -1.77
VPS50-209ENST00000467326 TTC31Q49AM3 519 aaPredicted RBP4.02□□□□□ -1.77
VPS50-209ENST00000467326 ZNF484Q5JVG2 852 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 CFAP58Q5T655 872 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 AADACL2Q6P093 401 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 DSTYKQ6XUX3 929 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 RASGRP2Q7LDG7 609 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 GALNT5Q7Z7M9 940 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 HORMAD2Q8N7B1 307 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 LSMEM1Q8N8F7 131 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 ARL10Q8N8L6 244 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 ENGASEQ8NFI3 743 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 BICD2Q8TD16 824 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 FAR1Q8WVX9 515 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 OIT3Q8WWZ8 545 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 TIGD1Q96MW7 591 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 TMEM204Q9BSN7 226 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 HERC2P3Q9BVR0 1158 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 SEZ6LQ9BYH1 1024 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 TWSG1Q9GZX9 223 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.02□□□□□ -1.77
VPS50-209ENST00000467326 HIPK2Q9H2X6 1198 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 KLHL31Q9H511 634 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 PLAC1Q9HBJ0 212 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 SLC13A4Q9UKG4 626 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 FZD10Q9ULW2 581 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 NAP1L2Q9ULW6 460 aaPredicted RBP4.02□□□□□ -1.77
VPS50-209ENST00000467326 MYO6Q9UM54 1294 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 OSGIN2Q9Y236 505 aa4.02□□□□□ -1.77
VPS50-209ENST00000467326 TTC3P53804 2025 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 STRNO43815 780 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ZBED4O75132 1171 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 FAM155BO75949 473 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 NGFRP08138 427 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 DHRS4L1P0CG22 281 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ARSBP15848 533 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 HOXA11P31270 313 aaPredicted RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 UBA7P41226 1012 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 AARSP49588 968 aaKnown RBP eCLIP4.01□□□□□ -1.77
VPS50-209ENST00000467326 ZNF131P52739 623 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ARL4CP56559 192 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 GOLGA8FQ08AF8 430 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ERV3-1Q14264 604 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ADCK5Q3MIX3 580 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 SYTL3Q4VX76 610 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 OTUD1Q5VV17 481 aaPredicted RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 RUSC1-AS1Q66K80 236 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 TMEM71Q6P5X7 295 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 MEPCEQ7L2J0 689 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 RPAINQ86UA6 219 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 WDR5BQ86VZ2 330 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 CADM3Q8N126 398 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms