RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SRGAP2BP0DMP2 458 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 AK2P54819 239 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 CDH12P55289 794 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 MPEG1Q2M385 716 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 PLA2G4FQ68DD2 849 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 IL31Q6EBC2 164 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 MDGA2Q7Z553 956 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 EXD3Q8N9H8 876 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 USP13Q92995 863 aaPredicted RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 CCDC138Q96M89 665 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 RBM4Q9BWF3 364 aaKnown RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 ZNF696Q9H7X3 374 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 ARNT2Q9HBZ2 717 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 DDX43Q9NXZ2 648 aaKnown RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 CA14Q9ULX7 337 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 DTNAQ9Y4J8 743 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 CEP83Q9Y592 693 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 RAI2Q9Y5P3 530 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 AGLP35573 1532 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 CEP170BQ9Y4F5 1589 aaPredicted RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 CDC42BPAQ5VT25 1732 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 PREX2Q70Z35 1606 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 A0A1W2PNU3 283 aaPredicted RBP3.92□□□□□ -1.78
XRN1-206ENST00000467077 HNRNPDLO14979 420 aaKnown RBP3.92□□□□□ -1.78
XRN1-206ENST00000467077 HSPA7P48741 367 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 NEK3P51956 506 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 TBX4P57082 545 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 DLG1Q12959 904 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 PICALMQ13492 652 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 ARL6IP4Q66PJ3 421 aaKnown RBP3.92□□□□□ -1.78
XRN1-206ENST00000467077 RASGRP3Q8IV61 690 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 CEP76Q8TAP6 659 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 TMEM163Q8TC26 289 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 CERS4Q9HA82 394 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 UBTD1Q9HAC8 227 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 NECTIN3Q9NQS3 549 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 SLC7A10Q9NS82 523 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 TM7SF3Q9NS93 570 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 FNIP2Q9P278 1114 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 PCDHGB2Q9Y5G2 931 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 CNTLNQ9NXG0 1405 aa3.92□□□□□ -1.78
XRN1-206ENST00000467077 SETD1AO15047 1707 aaKnown RBP3.92□□□□□ -1.78
XRN1-206ENST00000467077 CPS1P31327 1500 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 GXYLT2A0PJZ3 443 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 MCIDASD6RGH6 385 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 J3KTA2 159 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 NPC1O15118 1278 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 KCNA5P22460 613 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 NPATQ14207 1427 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 CSHL1Q14406 222 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 RAB30Q15771 203 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 XKR9Q5GH70 373 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 CCDC181Q5TID7 509 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 MSANTD2Q6P1R3 559 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 FOXL2NBQ6ZUU3 175 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 TTC30AQ86WT1 665 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 KIAA1191Q96A73 305 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 MYD88Q99836 296 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 ZNF334Q9HCZ1 680 aaPredicted RBP3.91□□□□□ -1.78
XRN1-206ENST00000467077 FSCN3Q9NQT6 498 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 HELLSQ9NRZ9 838 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 STRCP1A6NGW2 1772 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 DNMT1P26358 1616 aaKnown RBP3.91□□□□□ -1.78
XRN1-206ENST00000467077 PLA2R1Q13018 1463 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 MLH3Q9UHC1 1453 aa3.91□□□□□ -1.78
XRN1-206ENST00000467077 ABCC1P33527 1531 aa3.9□□□□□ -1.78
XRN1-206ENST00000467077 CLIP1P30622 1438 aa3.9□□□□□ -1.78
XRN1-206ENST00000467077 PNMA6EA0A0J9YXQ4 647 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 A0A0U1RQJ8 604 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 PCDH17O14917 1159 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 ZNF500O60304 480 aaPredicted RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 PLA2G6O60733 806 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 TAF5LO75529 589 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 ATP1A1P05023 1023 aaKnown RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 ITGA5P08648 1049 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 TYW3Q6IPR3 259 aaKnown RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 CCSAPQ6IQ19 270 aaPredicted RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 SLC26A9Q7LBE3 791 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 DEPTORQ8TB45 409 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 TAS1R2Q8TE23 839 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 IPO4Q8TEX9 1081 aaKnown RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 C18orf8Q96DM3 657 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 ZNF385AQ96PM9 386 aaKnown RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 PAAF1Q9BRP4 392 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 PCGF6Q9BYE7 350 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 STK33Q9BYT3 514 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 KCNK9Q9NPC2 374 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 SLC39A10Q9ULF5 831 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 TCOF1Q13428 1488 aaKnown RBP3.9□□□□□ -1.79
XRN1-206ENST00000467077 SHANK2Q9UPX8 1470 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 IQGAP1P46940 1657 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 ADGBQ8N7X0 1667 aa3.9□□□□□ -1.79
XRN1-206ENST00000467077 NEURL4Q96JN8 1562 aa3.89□□□□□ -1.79
XRN1-206ENST00000467077 PTPRKQ15262 1439 aa3.89□□□□□ -1.79
XRN1-206ENST00000467077 RNF17Q9BXT8 1623 aaKnown RBP3.89□□□□□ -1.79
XRN1-206ENST00000467077 ALKQ9UM73 1620 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms