RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 NEK3P51956 506 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 KRT83P78385 493 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 NFKB2Q00653 900 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 CETN1Q12798 172 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 LRRC73Q5JTD7 316 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 EFHC1Q5JVL4 640 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
SND1-203ENST00000463020 B3GNT8Q7Z7M8 397 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 MED8Q96G25 268 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 TBCBQ99426 244 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 DUSP23Q9BVJ7 150 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 BOCQ9BWV1 1114 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 CLPBQ9H078 707 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 USP29Q9HBJ7 922 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 DYRK4Q9NR20 520 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 RABGEF1Q9UJ41 708 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 NEMP2A6NFY4 417 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 BIN1O00499 593 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 TNFSF15O95150 251 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 ITGB7P26010 798 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 RBMS1P29558 406 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 DUSP3P51452 185 aaPredicted RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 CCNHP51946 323 aaPredicted RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 MARSP56192 900 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 PFN3P60673 137 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 RPS21P63220 83 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 SLC6A3Q01959 620 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 TCEA2Q15560 299 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 TGIF1Q15583 401 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 LINC00303Q3SY05 128 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 RBM44Q6ZP01 1051 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 SLC26A9Q7LBE3 791 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 LRRC61Q9BV99 259 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 C1QTNF2Q9BXJ5 285 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 NUP62CLQ9H1M0 184 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 NDFIP2Q9NV92 336 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 PCDHGC3Q9UN70 934 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 PCDHGA8Q9Y5G5 932 aa15.97■□□□□ 0.15
SND1-203ENST00000463020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.97■□□□□ 0.15
SND1-203ENST00000463020 TLN1Q9Y490 2541 aaKnown RBP15.97■□□□□ 0.15
SND1-203ENST00000463020 IGLV3-10A0A075B6K4 115 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 ARHGAP6O43182 974 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 ITIH2P19823 946 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 L1CAMP32004 1257 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 NOS2P35228 1153 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 IGFALSP35858 605 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 ACVRL1P37023 503 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SULT1E1P49888 294 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SERPINH1P50454 418 aaKnown RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 DNA2P51530 1060 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 CLCN6P51797 869 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 ADKP55263 362 aaKnown RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 RNASE9P60153 205 aaKnown RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 MORC3Q14149 939 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 NR0B2Q15466 257 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 C2CD6Q53TS8 623 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 KCTD16Q68DU8 428 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 KIAA1161Q6NSJ0 714 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 LEKR1Q6ZMV7 388 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 CLEC14AQ86T13 490 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SETD3Q86TU7 594 aaPredicted RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 SHC3Q92529 594 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 NT5C3BQ969T7 300 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 CCDC114Q96M63 670 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SPON2Q9BUD6 331 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SRRTQ9BXP5 876 aaKnown RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 MAGEB5Q9BZ81 275 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 TM6SF2Q9BZW4 377 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 ZDHHC6Q9H6R6 413 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SIX2Q9NPC8 291 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 CSNK1G3Q9Y6M4 447 aa15.96■□□□□ 0.15
SND1-203ENST00000463020 SPENQ96T58 3664 aaKnown RBP15.96■□□□□ 0.15
SND1-203ENST00000463020 CAPN8A6NHC0 703 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 NOBOXO60393 691 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 WISP1O95388 367 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 HGFP14210 728 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 OR1E1P30953 314 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 RABIFP47224 123 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 KCNC4Q03721 635 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 STIM1Q13586 685 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 CARD16Q5EG05 197 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 PRRT3Q5FWE3 981 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 CCDC81Q6ZN84 652 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 PRICKLE2Q7Z3G6 844 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 SLC47A2Q86VL8 602 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 DCP2Q8IU60 420 aaKnown RBP15.95■□□□□ 0.14
SND1-203ENST00000463020 NETO2Q8NC67 525 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
SND1-203ENST00000463020 CENPTQ96BT3 561 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 CCDC3Q9BQI4 270 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 HEPHQ9BQS7 1158 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 WDCPQ9H6R7 721 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 SYNDIG1Q9H7V2 258 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 MBNL1Q9NR56 388 aaKnown RBP15.95■□□□□ 0.14
SND1-203ENST00000463020 SALL4Q9UJQ4 1053 aa15.95■□□□□ 0.14
SND1-203ENST00000463020 C16orf96A6NNT2 1141 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms