RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TAF4O00268 1085 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 PRPF4O43172 522 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLK1-206ENST00000461326 CBX6O95503 412 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 TUBB4AP04350 444 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 PTPN2P17706 415 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 ALOX12P18054 663 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 TKTP29401 623 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 MLH1P40692 756 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 RPS3AP61247 264 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 YPEL5P62699 121 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 CYP4A11Q02928 519 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 CFHR1Q03591 330 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 DCTN2Q13561 401 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 CCNG2Q16589 344 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 GSTA3Q16772 222 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 SLC45A4Q5BKX6 768 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 ZNF667Q5HYK9 610 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 RUSC1-AS1Q66K80 236 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 TMEM154Q6P9G4 183 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 AAGABQ6PD74 315 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 FAM160B2Q86V87 743 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 DDIASQ8IXT1 998 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 ZDHHC23Q8IYP9 409 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 GALNT16Q8N428 558 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 PLD5Q8N7P1 536 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 CREB3L4Q8TEY5 395 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 IP6K1Q92551 441 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 SMARCE1Q969G3 411 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 KLHL15Q96M94 604 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 MPHOSPH8Q99549 860 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 NUDT16L1Q9BRJ7 211 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 H2AFJQ9BTM1 129 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 TUBB6Q9BUF5 446 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 FRMD8Q9BZ67 464 aaPredicted RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 HIPK3Q9H422 1215 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 MOV10Q9HCE1 1003 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 EIF2B3Q9NR50 452 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 BABAM1Q9NWV8 329 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 EHD2Q9NZN4 543 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 NCKIPSDQ9NZQ3 722 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 LIMA1Q9UHB6 759 aaKnown RBP4.04□□□□□ -1.76
CLK1-206ENST00000461326 FBXO4Q9UKT5 387 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 WDR17Q8IZU2 1322 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CYP2D7A0A087X1C5 515 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 PABPN1LA6NDY0 278 aaKnown RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 FOXO6A8MYZ6 492 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 EBAG9O00559 213 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 NEURL1O76050 574 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 TMCC1O94876 653 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CENPBP07199 599 aaPredicted RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 GALTP07902 379 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 SPARCP09486 303 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 MYZAPP0CAP1 466 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 NHLRC4P0CG21 123 aaPredicted RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 PCNAP12004 261 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 KELP23276 732 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 GPR12P47775 334 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CENPAP49450 140 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 FOXG1P55316 489 aaPredicted RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 TFF2Q03403 129 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 KLF9Q13886 244 aaPredicted RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 KCTD2Q14681 263 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 TAF11Q15544 211 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 ETFDHQ16134 617 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 HIST2H2ACQ16777 129 aaPredicted RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 SLC9B1Q4ZJI4 515 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 EARS2Q5JPH6 523 aaKnown RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 TBC1D9BQ66K14 1250 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CDC73Q6P1J9 531 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 NCEH1Q6PIU2 408 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 DEF8Q6ZN54 512 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 SLC46A3Q7Z3Q1 461 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CCDC25Q86WR0 208 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 ADGRF4Q8IZF3 695 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 DPP10Q8N608 796 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CCDC89Q8N998 374 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CADM4Q8NFZ8 388 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 OTULINQ96BN8 352 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 CCDC34Q96HJ3 373 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 MAP7D2Q96T17 732 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 BARD1Q99728 777 aaKnown RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 SDF4Q9BRK5 362 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 PIMREGQ9BSJ6 248 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 STRA6Q9BX79 667 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 SLC32A1Q9H598 525 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 C20orf141Q9NUB4 165 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 HCFC1R1Q9NWW0 138 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 HSPB7Q9UBY9 170 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 ZNF580Q9UK33 172 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 VPS28Q9UK41 221 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 AGO2Q9UKV8 859 aaKnown RBP4.03□□□□□ -1.76
CLK1-206ENST00000461326 GPR34Q9UPC5 381 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 TTLL3Q9Y4R7 772 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 PCDHGB5Q9Y5G0 923 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 SLC4A4Q9Y6R1 1079 aa4.03□□□□□ -1.76
CLK1-206ENST00000461326 A0A096LPK6 155 aa4.02□□□□□ -1.77
CLK1-206ENST00000461326 KIR2DS5A0A0G2JLQ3 304 aa4.02□□□□□ -1.77
CLK1-206ENST00000461326 A0A1W2PRG0 241 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms