RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZNF8P17098 575 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 NDUFB7P17568 137 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 EDN2P20800 178 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MUTP22033 750 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 PPP5CP53041 499 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 OAZ1P54368 228 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADPRHP54922 357 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 EEFSECP57772 596 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 PRAMEP78395 509 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 PLIN5Q00G26 463 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ZBTB16Q05516 673 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 DMWDQ09019 674 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 AIMP1Q12904 312 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 CSTF3Q12996 717 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 AIMP2Q13155 320 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 GSTA3Q16772 222 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 RAB41Q5JT25 222 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 SLC10A5Q5PT55 438 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 KAZNQ674X7 775 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 FAM83HQ6ZRV2 1179 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 DENND5BQ6ZUT9 1274 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 GALNTL5Q7Z4T8 443 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MDGA2Q7Z553 956 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 WDR53Q7Z5U6 358 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 NEK8Q86SG6 692 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 EXD3Q8N9H8 876 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 BOLLQ8N9W6 283 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 C11orf65Q8NCR3 313 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ACTRT2Q8TDY3 377 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 KAZALD1Q96I82 304 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 C1orf74Q96LT6 269 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADAD1Q96M93 576 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 MAP7D2Q96T17 732 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ANP32EQ9BTT0 268 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 TRIM2Q9C040 744 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 KLHL4Q9C0H6 718 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CWC25Q9NXE8 425 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 NCKIPSDQ9NZQ3 722 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MORF4L1Q9UBU8 362 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 COX11Q9Y6N1 276 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CLSPNQ9HAW4 1339 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 TCRBV7S3A2A0A539 114 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 OR6C68A6NDL8 312 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 A8MZ25 164 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 QSOX1O00391 747 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 USP12O75317 370 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 TUBBP07437 444 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 FCGR2AP12318 317 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 TGM2P21980 687 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 FBLP22087 321 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 FOLR3P41439 243 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 CLK3P49761 638 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 MRPL12P52815 198 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 UBXN2AP68543 259 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 SCARB2Q14108 478 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 KCNB1Q14721 858 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 ZNF169Q14929 603 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 TBC1D25Q3MII6 688 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 AKNAD1Q5T1N1 836 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 SERTAD4-AS1Q5TG53 156 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 GARNL3Q5VVW2 1013 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 ATG9BQ674R7 924 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 NUGGCQ68CJ6 796 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 KIAA0895LQ68EN5 471 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 TSSK4Q6SA08 328 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 SARM1Q6SZW1 724 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 KDELC2Q7Z4H8 507 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 BCDIN3DQ7Z5W3 292 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 DNAJB7Q7Z6W7 309 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 ARHGEF25Q86VW2 580 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 POC5Q8NA72 575 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 GTF3C6Q969F1 213 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 ZKSCAN4Q969J2 545 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 SAT2Q96F10 170 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 ZNF845Q96IR2 970 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 SPATA17Q96L03 361 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 NAP1L5Q96NT1 182 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 THAP7Q9BT49 309 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 APOL6Q9BWW8 343 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 STRA6Q9BX79 667 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 CIPCQ9C0C6 399 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 Q9N2J8 555 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 ENTPD7Q9NQZ7 604 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 RRP7BPQ9NSQ0 103 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 ATP8A2Q9NTI2 1148 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 SERTAD4Q9NUC0 356 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 KIAA1456Q9P272 454 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 SEMA5BQ9P283 1151 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 CPSF2Q9P2I0 782 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 NLKQ9UBE8 527 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 DHDHQ9UQ10 334 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 HEMK1Q9Y5R4 338 aaPredicted RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 TTC36A6NLP5 189 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 LRRC53A6NM62 1247 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 LINC00473A8K010 186 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 KCNJ18B7U540 433 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 CTDSP2O14595 271 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 EXOC3O60645 756 aa3.11□□□□□ -1.91
HPS3-203ENST00000460822 IPO7O95373 1038 aaKnown RBP3.11□□□□□ -1.91
HPS3-203ENST00000460822 TTLL1O95922 423 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms