RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CES3Q6UWW8 571 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 FRMD7Q6ZUT3 714 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SERINC5Q86VE9 423 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PQLC1Q8N2U9 271 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ADCY4Q8NFM4 1077 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 NDRG1Q92597 394 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 MAELQ96JY0 434 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SUSD3Q96L08 255 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 LRGUKQ96M69 825 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 EFHD1Q9BUP0 239 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 FICDQ9BVA6 458 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 C1QTNF1Q9BXJ1 281 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 UPF3AQ9H1J1 476 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF385DQ9H6B1 395 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF408Q9H9D4 720 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 POPDC3Q9HBV1 291 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ZBTB26Q9HCK0 441 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 VCX3AQ9NNX9 186 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PFDN4Q9NQP4 134 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 TREX1Q9NSU2 369 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PLK2Q9NYY3 685 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SLC17A6Q9P2U8 582 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 FBXO5Q9UKT4 447 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 CNOT11Q9UKZ1 510 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 RIMKLBQ9ULI2 386 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PPM1HQ9ULR3 514 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 RAB26Q9ULW5 256 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 RUVBL2Q9Y230 463 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 TLR6Q9Y2C9 796 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SLC4A7Q9Y6M7 1214 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SMIM31A0A1B0GVY4 71 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 BBIP1A8MTZ0 92 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TARM1B6A8C7 271 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 E9PBE3 544 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TMEM189-UBE2V1I3L0A0 370 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 BUD23O43709 281 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 AP1G1O43747 822 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 KLHL41O60662 606 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 B3GAT3O94766 335 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 LYNP07948 512 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 LTA4HP09960 611 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 CPB1P15086 417 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RHOQP17081 205 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ME2P23368 584 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 NAGLUP54802 743 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ROR2Q01974 943 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 USP4Q13107 963 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 FLOT2Q14254 428 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ACAP2Q15057 778 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ADRM1Q16186 407 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 MMEL1Q495T6 779 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TIGD5Q53EQ6 642 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 OGFRL1Q5TC84 451 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 MFSD14CQ5VZR4 134 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 NEPROQ6NW34 567 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 PRMT9Q6P2P2 845 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RANBP10Q6VN20 620 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 HACD2Q6Y1H2 254 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 GPRIN1Q7Z2K8 1008 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 EFL1Q7Z2Z2 1120 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RAB44Q7Z6P3 723 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 MON1AQ86VX9 555 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ARHGAP12Q8IWW6 846 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 PLD6Q8N2A8 252 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 UMODL1-AS1Q8N2C9 162 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 BBS5Q8N3I7 341 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 FSTL5Q8N475 847 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 POU5F2Q8N7G0 328 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ATP6V0D2Q8N8Y2 350 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RNF169Q8NCN4 708 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 IPMKQ8NFU5 416 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 FBXO27Q8NI29 283 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ZSCAN18Q8TBC5 510 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 GDPD5Q8WTR4 605 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RSPH1Q8WYR4 309 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 EDEM1Q92611 657 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 IFT43Q96FT9 208 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ATXN7L3BQ96GX2 97 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ELMO2Q96JJ3 720 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 ZFRQ96KR1 1074 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 FCRL2Q96LA5 508 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 PKMYT1Q99640 499 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 SH3GL3Q99963 347 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 OXCT2Q9BYC2 517 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 MRPL1Q9BYD6 325 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TRIM15Q9C019 465 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 C8orf4Q9NR00 106 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TMPRSS4Q9NRS4 437 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 RBM22Q9NW64 420 aaKnown RBP eCLIP8.94□□□□□ -0.981e-7■■■■■ 41.1
HDAC3-202ENST00000459727 PIH1D1Q9NWS0 290 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 COMMD8Q9NX08 183 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 OSER1Q9NX31 292 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms