RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TLE3Q04726 772 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 SEL1L3Q68CR1 1132 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 DNAJC24Q6P3W2 148 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 SPACA3Q8IXA5 215 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 CCDC185Q8N715 623 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 OR6K2Q8NGY2 324 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 SNIP1Q8TAD8 396 aaKnown RBP16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 PCDHB18PQ96TA0 734 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 LGMNQ99538 433 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 HDAC8Q9BY41 377 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 ZNF212Q9UDV6 495 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 PCDHGA1Q9Y5H4 931 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 ACTL7AQ9Y615 435 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 TDRD6O60522 2096 aaKnown RBP16.04■□□□□ 0.16
CHCHD3-204ENST00000457942 TEX51A0A1B0GUA7 166 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 RNF103O00237 685 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 ZMPSTE24O75844 475 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 LRIG2O94898 1065 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 MBD3O95983 291 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 PLEKP08567 350 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 ADRB3P13945 408 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 ITGB7P26010 798 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 RXRGP48443 463 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 HDAC4P56524 1084 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 NRG1Q02297 640 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 ZNF284Q2VY69 593 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 CCDC183Q5T5S1 534 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 KDM7AQ6ZMT4 941 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 NDFIP2Q9NV92 336 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 TMEM248Q9NWD8 314 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 HECAQ9UBI9 543 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 MYLKQ15746 1914 aa16.03■□□□□ 0.16
CHCHD3-204ENST00000457942 FAM72CH0Y354 149 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 NEMP1O14524 444 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 ZNF821O75541 412 aaPredicted RBP16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 CCDC172P0C7W6 258 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 CLDN2P57739 230 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 PTP4A2Q12974 167 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 RTP5Q14D33 572 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 FAM72AQ5TYM5 149 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 MANEALQ5VSG8 457 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 FAM72DQ6L9T8 149 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 KIAA1161Q6NSJ0 714 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 DCUN1D2Q6PH85 259 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 PARS2Q7L3T8 475 aaKnown RBP16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 SLFN11Q7Z7L1 901 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 FAM72BQ86X60 149 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 TMEM145Q8NBT3 493 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 ARHGEF2Q92974 986 aaKnown RBP16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 NTAN1Q96AB6 310 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 AGPAT1Q99943 283 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 SEMA4CQ9C0C4 833 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 MAGEH1Q9H213 219 aa16.02■□□□□ 0.16
CHCHD3-204ENST00000457942 CHD5Q8TDI0 1954 aa16.02■□□□□ 0.15
CHCHD3-204ENST00000457942 A6NNZ2 444 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 KRIT1O00522 736 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 CCP110O43303 1012 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 BUB1O43683 1085 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 CREB3O43889 395 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 C1SP09871 688 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 CDK4P11802 303 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 FERP16591 822 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 EPHB2P29323 1055 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 L1CAMP32004 1257 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 GKP32189 559 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 GSCP56915 257 aaPredicted RBP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 SNRPD1P62314 119 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 RPS21P63220 83 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 DAB2P98082 770 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 ARTNQ5T4W7 220 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 ARHGAP40Q5TG30 622 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 SFMBT2Q5VUG0 894 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 MON1BQ7L1V2 547 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 NLRP14Q86W24 1093 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 OR13H1Q8NG92 308 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 CENPIQ92674 756 aaPredicted RBP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 FGF11Q92914 225 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 ERGIC2Q96RQ1 377 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 EPAS1Q99814 870 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 MAGEB5Q9BZ81 275 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 NRSN2Q9GZP1 204 aa16.01■□□□□ 0.15
CHCHD3-204ENST00000457942 RETREG1Q9H6L5 497 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms