RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 FETUBQ9UGM5 382 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CNTN6Q9UQ52 1028 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ARID2Q68CP9 1835 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TCRBV3S1A0A5B6 114 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 IPO5O00410 1097 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TPP1O14773 563 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 BIRC5O15392 142 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 XPNPEP2O43895 674 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 MTHFD1P11586 935 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 GLRBP48167 497 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 P2RX3P56373 397 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 NCS1P62166 190 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CHRNEQ04844 493 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC12A1Q13621 1099 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CDONQ4KMG0 1287 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 RABL3Q5HYI8 236 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 C8orf82Q6P1X6 216 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ADGRG5Q8IZF4 528 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 EID3Q8N140 333 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 LINC00116Q8NCU8 138 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ADCY4Q8NFM4 1077 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 BRSK1Q8TDC3 778 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 LGMNQ99538 433 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC77Q9BR77 488 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 FUNDC2Q9BWH2 189 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM126AQ9BYI3 521 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CACNA2D2Q9NY47 1150 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 GJD2Q9UKL4 321 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 EIF3LQ9Y262 564 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 IFT52Q9Y366 437 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ADGRA2Q96PE1 1338 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 UBR3Q6ZT12 1888 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 H3BUI4 141 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SDHDO14521 159 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 EIF3DO15371 548 aaKnown RBP eCLIP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 HNRNPCL1O60812 293 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 HLA-DRAP01903 254 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PGRP06401 933 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ATP5DP30049 168 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PLK1P53350 603 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PDAP1Q13442 181 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC36A3Q495N2 470 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CEP55Q53EZ4 464 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 GPATCH4Q5T3I0 446 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 FYB2Q5VWT5 728 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PPIL6Q8IXY8 311 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 KIAA2013Q8IYS2 634 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ELMOD1Q8N336 334 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 OR10Q1Q8NGQ4 319 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 OR6F1Q8NGZ6 308 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CHAC2Q8WUX2 184 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 EMID1Q96A84 441 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 NACC2Q96BF6 587 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TDRD1Q9BXT4 1180 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB34Q9BZG1 259 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF38Q9H0F5 515 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 DHX35Q9H5Z1 703 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC167Q9P0B6 97 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB26Q9ULW5 256 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF335Q9H4Z2 1342 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CIB4A0PJX0 185 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 K7ENM7 598 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 C8BP07358 591 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SNRPAP09012 282 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT5P13647 590 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PTPN2P17706 415 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CAPN3P20807 821 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CRHR1P34998 444 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 DCAF8Q5TAQ9 597 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 KCTD8Q6ZWB6 473 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CTU1Q7Z7A3 348 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 DOCK3Q8IZD9 2030 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TMC2Q8TDI7 906 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 HTRA1Q92743 480 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TMA16Q96EY4 203 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CDK5RAP1Q96SZ6 601 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 BBS2Q9BXC9 721 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CALN1Q9BXU9 219 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 EMILIN2Q9BXX0 1053 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 WDR41Q9HAD4 459 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 IFT122Q9HBG6 1241 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 C6orf203Q9P0P8 240 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TXNDC16Q9P2K2 825 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PRR12Q9ULL5 1215 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ITM2BQ9Y287 266 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SHANK1Q9Y566 2161 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CEP250Q9BV73 2442 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 KIAA2026Q5HYC2 2103 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TNRC6CQ9HCJ0 1690 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ROBO1Q9Y6N7 1651 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 C6orf229H3BNL8 230 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ZZEF1O43149 2961 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PHGDHO43175 533 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TADA2AO75478 443 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 HMGCRP04035 888 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 UBL4AP11441 157 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 OSBPP22059 807 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC6A2P23975 617 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TRPC1P48995 793 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CLDN10P78369 228 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms