RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 FAM193BQ96PV7 902 aaPredicted RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 THTPAQ9BU02 230 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 TRPV6Q9H1D0 765 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CPSF2Q9P2I0 782 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 RUVBL2Q9Y230 463 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 RAP2CQ9Y3L5 183 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 CCDC78A2IDD5 438 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 MOXD2PA6NHM9 499 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 PHGDHO43175 533 aaKnown RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 KRT36O76013 467 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 STMN1P16949 149 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 VHLP40337 213 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 NUMBP49757 651 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 PSEN1P49768 467 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 COPAP53621 1224 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 WNT3AP56704 352 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 MXRA7P84157 204 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 USP4Q13107 963 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 CTBP1Q13363 440 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 CCDC6Q16204 474 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 CNGA3Q16281 694 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 MS4A13Q5J8X5 152 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 DENND6AQ8IWF6 608 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 CENPLQ8N0S6 344 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 TDRD5Q8NAT2 981 aaKnown RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 HHIPL1Q96JK4 782 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 FTHL17Q9BXU8 183 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 OXCT2Q9BYC2 517 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 OLA1Q9NTK5 396 aaKnown RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 RNF186Q9NXI6 227 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 FAM95CA0A1B0GW59 222 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 HEATR9A2RTY3 570 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 OR6C75A6NL08 312 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 LUC7L3O95232 432 aaKnown RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 GPR15P49685 360 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 ACTR3P61158 418 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 USP46P62068 366 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 CAP1Q01518 475 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 TRIP4Q15650 581 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 TSNAXIP1Q2TAA8 658 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 VWA5B1Q5TIE3 1220 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 SLC41A1Q8IVJ1 513 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 FSTL5Q8N475 847 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 TEX26Q8N6G2 289 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
LDLR-202ENST00000455727 BTN2A3PQ96KV6 586 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 GPR78Q96P69 363 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 GMIPQ9P107 970 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 ZNF212Q9UDV6 495 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 SLC7A8Q9UHI5 535 aa15.25■□□□□ 0.03
LDLR-202ENST00000455727 GREB1Q4ZG55 1949 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 A0A087X1B8 175 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 SLCO1B7G3V0H7 640 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 TK2O00142 265 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 MATN2O00339 956 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 SNUPNO95149 360 aaKnown RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 RTN3O95197 1032 aaPredicted RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 PAPSS2O95340 614 aaPredicted RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 YWHAQP27348 245 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 GRK4P32298 578 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 SLC1A2P43004 574 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 GRIA4P48058 902 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 CD151P48509 253 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 MPP1Q00013 466 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 POU4F1Q01851 419 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 ASPHQ12797 758 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 MARC1Q5VT66 337 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 SDHAF4Q5VUM1 108 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 LRRC8EQ6NSJ5 796 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 CALML6Q8TD86 181 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 PDCD6IPQ8WUM4 868 aaKnown RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 KCTD4Q8WVF5 259 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 TSEN34Q9BSV6 310 aaKnown RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 TMEM161AQ9NX61 479 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 SLC2A6Q9UGQ3 507 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 FBXO5Q9UKT4 447 aa15.24■□□□□ 0.03
LDLR-202ENST00000455727 PRG3Q9Y2Y8 225 aaPredicted RBP15.24■□□□□ 0.03
LDLR-202ENST00000455727 A0A088AWK7 358 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 TBX10O75333 385 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 ATP6V1C1P21283 382 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 SAT1P21673 171 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 GLDCP23378 1020 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 SERPINH1P50454 418 aaKnown RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 RPL14P50914 215 aaKnown RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 CLNS1AP54105 237 aaKnown RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 PRKAA1Q13131 559 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 CTXN3Q4LDR2 81 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 NEPROQ6NW34 567 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 CEP97Q8IW35 865 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 MFSD6LQ8IWD5 586 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 SLC43A3Q8NBI5 491 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 HMCESQ96FZ2 354 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 SCYL1Q96KG9 808 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 GPAMQ9HCL2 828 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.23■□□□□ 0.03
LDLR-202ENST00000455727 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 VTI1BQ9UEU0 232 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 ABT1Q9ULW3 272 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms