RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PALMDQ9NP74 551 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 UCKL1Q9NWZ5 548 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SIDT1Q9NXL6 827 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 MPP6Q9NZW5 540 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 FBLN5Q9UBX5 448 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CAPN11Q9UMQ6 739 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NFU1Q9UMS0 254 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDYLQ9Y232 598 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TDRKHQ9Y2W6 561 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 RWDD3Q9Y3V2 267 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ENTPD2Q9Y5L3 495 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TCRBV21S2A2A0A5A6 115 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 A6NL46 340 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 AQP7P3A6NL99 342 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 A8MZ25 164 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 E9PBE3 544 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RFXAPO00287 272 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 N4BP3O15049 544 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RNF113AO15541 343 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 NUDT21O43809 227 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FOXD2O60548 495 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GPR32O75388 356 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 MTX2O75431 263 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FLOT1O75955 427 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLCO2B1O94956 709 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CER1O95813 267 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ONECUT2O95948 504 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 MT-ATP6P00846 226 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 TGFAP01135 160 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GLI4P10075 376 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GABRB1P18505 474 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CTNNB1P35222 781 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 SREBF1P36956 1147 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FASLGP48023 281 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PTDSS1P48651 473 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 KHKP50053 298 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDK7P50613 346 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RAB28P51157 221 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCR3P51677 355 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 WNT3AP56704 352 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CD83Q01151 205 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 IL24Q13007 206 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RAPSNQ13702 412 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 DDX39BQ13838 428 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 IL11RAQ14626 422 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RRS1Q15050 365 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 TAZQ16635 292 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 LEXMQ3ZCV2 418 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GLE1Q53GS7 698 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 IGSF11Q5DX21 431 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FBXO48Q5FWF7 155 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 TCTE1Q5JU00 501 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZNF569Q5MCW4 686 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPDYCQ5MJ68 293 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ATAD3BQ5T9A4 648 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 HMBOX1Q6NT76 420 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RBPMS2Q6ZRY4 209 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 Q6ZVL8 140 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC80Q76M96 950 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CENPQQ7L2Z9 268 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RRM2BQ7LG56 351 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARHGAP12Q8IWW6 846 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 DNAJC10Q8IXB1 793 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 BBS5Q8N3I7 341 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARL14Q8N4G2 192 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RBM15BQ8NDT2 890 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 OR52M1Q8NGK5 317 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CALML6Q8TD86 181 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GANCQ8TET4 914 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 MZB1Q8WU39 189 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM149B1Q96BN6 582 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PTERQ96BW5 349 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ALG14Q96F25 216 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 TOE1Q96GM8 510 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ATP6V1G3Q96LB4 118 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 SIGLEC10Q96LC7 697 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 C5orf34Q96MH7 638 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDK5RAP1Q96SZ6 601 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PAFAH2Q99487 392 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 DDX50Q9BQ39 737 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 BCL7BQ9BQE9 202 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 SYT17Q9BSW7 474 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PITHD1Q9GZP4 211 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 IQCGQ9H095 443 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 XKR8Q9H6D3 395 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 WDR26Q9H7D7 661 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 POLR1BQ9H9Y6 1135 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 NGBQ9NPG2 151 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 FSCN3Q9NQT6 498 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARHGEF38Q9NXL2 777 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 GDAP2Q9NXN4 497 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMOD3Q9NYL9 352 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ANKMY1Q9P2S6 941 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDH22Q9UJ99 828 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRDM4Q9UKN5 801 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PADI1Q9ULC6 663 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms