RNA–Protein interactions for RNA: ENST00000452172.1

XPC-203, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-203ENST00000452172 LPIN2Q92539 896 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 NELL1Q92832 810 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 HVCN1Q96D96 273 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 RRP36Q96EU6 259 aaKnown RBP3.67□□□□□ -1.82
XPC-203ENST00000452172 WWC2-AS2Q96NR7 200 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 ZCCHC4Q9H5U6 513 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 CCDC134Q9H6E4 229 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 NOD2Q9HC29 1040 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 GLOD4Q9HC38 313 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 ERVK-5Q9HDB9 667 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 STEAP1Q9UHE8 339 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 NFU1Q9UMS0 254 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 PCDHB7Q9Y5E2 793 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 RAI2Q9Y5P3 530 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 SCINQ9Y6U3 715 aa3.67□□□□□ -1.82
XPC-203ENST00000452172 FNDC1Q4ZHG4 1894 aaPredicted RBP3.67□□□□□ -1.82
XPC-203ENST00000452172 ZNF462Q96JM2 2506 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 GXYLT2A0PJZ3 443 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 A1L4Q6 167 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 SLC38A8A6NNN8 435 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 PRSS47A8MTI9 375 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 STX16-NPEPL1H3BU86 382 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 M0QYT0 321 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 STX16O14662 325 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 SLC16A3O15427 465 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 CTIFO43310 598 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 KCNK5O95279 499 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LARGE1O95461 756 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TBX18O95935 607 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 ITGB3P05106 788 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LDHCP07864 332 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 RETP07949 1114 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TMEM225BP0DP42 221 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 PLA2G2AP14555 144 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 CD19P15391 556 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 HOXB8P17481 243 aaPredicted RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 DDX6P26196 483 aaKnown RBP eCLIP3.66□□□□□ -1.82
XPC-203ENST00000452172 ACRV1P26436 265 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TDGQ13569 410 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 KCNC3Q14003 757 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 ANKRD1Q15327 319 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 SHROOM1Q2M3G4 852 aaPredicted RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 TCTN1Q2MV58 587 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 CCDC30Q5VVM6 783 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 DGAT2L7PQ6IED9 249 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 CCDC144NLQ6NUI1 221 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TATDN1Q6P1N9 297 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TMPRSS6Q8IU80 811 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LRRC71Q8N4P6 559 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LINS1Q8NG48 757 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 ACER1Q8TDN7 264 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 SSH3Q8TE77 659 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 HDAC2Q92769 488 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 P2RX5Q93086 422 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 R3HDM4Q96D70 268 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 NECTIN4Q96NY8 510 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 NEK1Q96PY6 1258 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 YME1L1Q96TA2 773 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 EIF3CQ99613 913 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 CDCA3Q99618 268 aaPredicted RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 REEP2Q9BRK0 252 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 PAAF1Q9BRP4 392 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 GPR63Q9BZJ6 419 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 DNAJC18Q9H819 358 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 JMJD4Q9H9V9 463 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 CD248Q9HCU0 757 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 TRIM36Q9NQ86 728 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LIN7CQ9NUP9 197 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 NKX1-2Q9UD57 310 aaPredicted RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 GMEB2Q9UKD1 530 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 BARX2Q9UMQ3 279 aaPredicted RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 DNAJC16Q9Y2G8 782 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.66□□□□□ -1.82
XPC-203ENST00000452172 WDFY3Q8IZQ1 3526 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 ITIH6Q6UXX5 1313 aa3.66□□□□□ -1.82
XPC-203ENST00000452172 LOC400499M0QZD8 3231 aa3.65□□□□□ -1.82
XPC-203ENST00000452172 PTPN13Q12923 2485 aa3.65□□□□□ -1.82
XPC-203ENST00000452172 LOC105369274A0A096LPK9 316 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 LOC102723532A0A0G2JNH3 316 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 CCDC196A0A1B0GTZ2 297 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.65□□□□□ -1.83
XPC-203ENST00000452172 UNC119BA6NIH7 251 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 C2CD4DB7Z1M9 353 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 M0QZQ0 153 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 PSMD9O00233 223 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 SPDEFO95238 335 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 GH2P01242 217 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 FESP07332 822 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 RHOP08100 348 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 HNRNPA1P09651 372 aaKnown RBP eCLIP3.65□□□□□ -1.83
XPC-203ENST00000452172 NR4A1P22736 598 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 THBS4P35443 961 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 LIPAP38571 399 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 TMPOP42166 694 aaKnown RBP3.65□□□□□ -1.83
XPC-203ENST00000452172 NRIP1P48552 1158 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 MCM2P49736 904 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 CLCN2P51788 898 aa3.65□□□□□ -1.83
XPC-203ENST00000452172 FAM3BP58499 235 aaPredicted RBP3.65□□□□□ -1.83
XPC-203ENST00000452172 RNASELQ05823 741 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms