RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PCDH18Q9HCL0 1135 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ST7Q9NRC1 585 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 CFAP97Q9P2B7 532 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 TLK1Q9UKI8 766 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ARHGAP26Q9UNA1 814 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 PCDHB4Q9Y5E5 795 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 STK36Q9NRP7 1315 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 TLN2Q9Y4G6 2542 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 OR6C75A6NL08 312 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CALM1P0DP23 149 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CALM2P0DP24 149 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CALM3P0DP25 149 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 HAPLN1P10915 354 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-205ENST00000447267 PCP11498 1178 aaKnown RBP5.23□□□□□ -1.57
SDCBP-205ENST00000447267 TCF3P15923 654 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF20P17024 532 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 TNFRSF1AP19438 455 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 HTR1EP28566 365 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 TLE4Q04727 773 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CDC20Q12834 499 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 KCNJ12Q14500 433 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 KCNB1Q14721 858 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 SEC23AQ15436 765 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CDSNQ15517 529 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 DDR2Q16832 855 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 ARMCX5Q6P1M9 558 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 NIPA1Q7RTP0 329 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 DSG4Q86SJ6 1040 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 USP37Q86T82 979 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 LRRTM3Q86VH5 581 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 ULK2Q8IYT8 1036 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 OR10T2Q8NGX3 314 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 SERAC1Q96JX3 654 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 PPP1R13BQ96KQ4 1090 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CEP170P1Q96L14 293 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CCDC140Q96MF4 163 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 LHX5Q9H2C1 402 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 PDZD7Q9H5P4 517 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 ERVMER34-1Q9H9K5 563 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 GJB4Q9NTQ9 266 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 DNAJC17Q9NVM6 304 aaKnown RBP5.23□□□□□ -1.57
SDCBP-205ENST00000447267 PPP4R1LQ9P1A2 415 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 CROTQ9UKG9 612 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 COA3Q9Y2R0 106 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-205ENST00000447267 LOXL2Q9Y4K0 774 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 NUMA1Q14980 2115 aa5.23□□□□□ -1.57
SDCBP-205ENST00000447267 PKDREJQ9NTG1 2253 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 DOCK9Q9BZ29 2069 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 SLC9A3R1O14745 358 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MUSKO15146 869 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MATN3O15232 486 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 ASAP2O43150 1006 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 KLF4O43474 513 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 LY6G6DO95868 133 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MEOX1P50221 254 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 OSTNP61366 133 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CDK18Q07002 472 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MAP4K2Q12851 820 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CAPSQ13938 189 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 PCBP1Q15365 356 aaKnown RBP eCLIP5.22□□□□□ -1.57
SDCBP-205ENST00000447267 PRR16Q569H4 304 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 VWA2Q5GFL6 755 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MIER3Q7Z3K6 550 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 ADGRF2Q8IZF7 708 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 UNC5BQ8IZJ1 945 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 LGI4Q8N135 537 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 NXPE1Q8N323 547 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 Q8NA96 180 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CENPTQ96BT3 561 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 JPH2Q9BR39 696 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-205ENST00000447267 UBAC1Q9BSL1 405 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CXXC4Q9H2H0 198 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 RNF41Q9H4P4 317 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-205ENST00000447267 DHX33Q9H6R0 707 aaKnown RBP5.22□□□□□ -1.57
SDCBP-205ENST00000447267 ASF1BQ9NVP2 202 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MYOTQ9UBF9 498 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 ASH2LQ9UBL3 628 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 OSGIN2Q9Y236 505 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CA5BQ9Y2D0 317 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CPQQ9Y646 472 aa5.22□□□□□ -1.57
SDCBP-205ENST00000447267 CUBNO60494 3623 aa5.21□□□□□ -1.57
SDCBP-205ENST00000447267 C19orf84I3L1E1 186 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 M0QZQ0 153 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ADAMTS3O15072 1205 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 IPO8O15397 1037 aaKnown RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 MSH4O15457 936 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 HOXC11O43248 304 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 PRPF3O43395 683 aaKnown RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 RAB11FIP3O75154 756 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ATP2C2O75185 946 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 TCEA3O75764 348 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 DNAJB5O75953 348 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 LTFP02788 710 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 HEXAP06865 529 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 PRKCHP24723 683 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 HNRNPH3P31942 346 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms