RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 DOCK9Q9BZ29 2069 aa16.13■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ARID1BQ8NFD5 2236 aaPredicted RBP16.13■□□□□ 0.17
SPTLC1P1-201ENST00000447199 WASH4PA8MWX3 477 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SPINT1O43278 529 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KDELR3O43731 214 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PCDH8O95206 1070 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 C1SP09871 688 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ABL2P42684 1182 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CLDN2P57739 230 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 POLD3Q15054 466 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 EFHC2Q5JST6 749 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KIAA1161Q6NSJ0 714 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SLC25A45Q8N413 288 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 OR2AP1Q8NGE2 309 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 MDM1Q8TC05 714 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 LRIG1Q96JA1 1093 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 BMFQ96LC9 184 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KLC2Q9H0B6 622 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CCDC86Q9H6F5 360 aaKnown RBP16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ZDHHC6Q9H6R6 413 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KLHL11Q9NVR0 708 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ACACAQ13085 2346 aa16.12■□□□□ 0.17
SPTLC1P1-201ENST00000447199 FAM149AA5PLN7 773 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 C16orf96A6NNT2 1141 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RAD51BO15315 384 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CCDC172P0C7W6 258 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 EPHB2P29323 1055 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 AIF1P55008 147 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RPS21P63220 83 aaKnown RBP16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CCDC157Q569K6 752 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ZNF805Q5CZA5 627 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 FBXL19Q6PCT2 694 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 LEKR1Q6ZMV7 388 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TMPRSS12Q86WS5 348 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 OR6K2Q8NGY2 324 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 FAM174AQ8TBP5 190 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 VCPIP1Q96JH7 1222 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SLC17A9Q9BYT1 436 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CAAP1Q9H8G2 361 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 HPCAL4Q9UM19 191 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 HS3ST3A1Q9Y663 406 aa16.11■□□□□ 0.17
SPTLC1P1-201ENST00000447199 POM121BA6NF01 834 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TRABD2BA6NFA1 517 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TRIM38O00635 465 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SDC3O75056 442 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RFPL3O75679 317 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TMCC1O94876 653 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 POP4O95707 220 aaKnown RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 GIMD1P0DJR0 217 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CDK4P11802 303 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 DGKAP23743 735 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 YBEYP58557 167 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 MAMLD1Q13495 774 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SERINC3Q13530 473 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 MYLK3Q32MK0 819 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 INO80DQ53TQ3 878 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ATXN7L2Q5T6C5 722 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PLEKHA7Q6IQ23 1121 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 UMODL1-AS1Q8N2C9 162 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ARFGAP1Q8N6T3 406 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RAB7BQ96AH8 199 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 IFT43Q96FT9 208 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 HMCESQ96FZ2 354 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 FEM1CQ96JP0 617 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 LENG8Q96PV6 779 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KLF6Q99612 283 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 C1QTNF2Q9BXJ5 285 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TTYH3Q9C0H2 523 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 UCKL1Q9NWZ5 548 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
SPTLC1P1-201ENST00000447199 GOLGA4Q13439 2230 aaKnown RBP16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 A0A1B0GTH6 734 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 A0A1W2PQC6 194 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RASA4BC9J798 803 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KRIT1O00522 736 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 AREL1O15033 823 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 RASA4O43374 803 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TSPAN6O43657 245 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 BUB1O43683 1085 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PAK4O96013 591 aaPredicted RBP16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CKMT2P17540 419 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CLDN6P56747 220 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ILKQ13418 452 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PARP15Q460N3 678 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 PPP1R2P3Q6NXS1 205 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 DCUN1D2Q6PH85 259 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 KYAT3Q6YP21 454 aaKnown RBP16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 Q6ZSR6 202 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ASB12Q8WXK4 309 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms