RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 ZDHHC15Q96MV8 337 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TMEM246Q9BRR3 403 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ZNF416Q9BWM5 594 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TWSG1Q9GZX9 223 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GOLPH3Q9H4A6 298 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 RSAD1Q9HA92 442 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PCDHB16Q9NRJ7 776 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GLTPQ9NZD2 209 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 KCNH3Q9ULD8 1083 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ASTN2O75129 1339 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SPATA31A6Q5VVP1 1343 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 LEUTXA8MZ59 168 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ZNF879B4DU55 563 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 NPC1O15118 1278 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ANGPT2O15123 496 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HS6ST1O60243 411 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TSPAN3O60637 253 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SRGAP2O75044 1071 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 RAB3DO95716 219 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 OPN1LWP04000 364 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HOXD4P09016 255 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MLNP12872 115 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ATP1A3P13637 1013 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TRIM27P14373 513 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PFKLP17858 780 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TGM1P22735 817 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 GJB2P29033 226 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SOX9P48436 509 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 CDH4P55283 916 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ERVK-8P63133 956 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 RACK1P63244 317 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 GLO1Q04760 184 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MGAT3Q09327 533 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SSX2Q16385 188 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 YIF1BQ5BJH7 314 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PKN3Q6P5Z2 889 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TMEM65Q6PI78 240 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 KIAA1324Q6UXG2 1013 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 CDH24Q86UP0 819 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TPRA1Q86W33 373 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 C4orf33Q8N1A6 199 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ANKLE1Q8NAG6 615 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MCUQ8NE86 351 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HTR3CQ8WXA8 447 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PHKBQ93100 1093 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 C18orf8Q96DM3 657 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MCRS1Q96EZ8 462 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MAGED4Q96JG8 741 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 C9orf72Q96LT7 481 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ZNF285Q96NJ3 590 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 CHCHD6Q9BRQ6 235 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SLC25A23Q9BV35 468 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PAPOLGQ9BWT3 736 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MRPS30Q9NP92 439 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SIRPGQ9P1W8 387 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 KLHL14Q9P2G3 628 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PLCL2Q9UPR0 1127 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 TESMINQ9Y4I5 508 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 KRT87PA6NCN2 255 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ZNF197O14709 1029 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 USP12O75317 370 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 GPX5O75715 221 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HEXIM1O94992 359 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 NADKO95544 446 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ATP1A1P05023 1023 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 C8BP07358 591 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 FAM153BP0C7A2 387 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 CYP11B1P15538 503 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ITIH2P19823 946 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ACTR1BP42025 376 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 AFMP43652 599 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ALDH3B2P48448 385 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HUNKP57058 714 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 JAM2P57087 298 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 EIF3EP60228 445 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ARID5AQ03989 594 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SLC3A1Q07837 685 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 PCBP1Q15365 356 aaKnown RBP eCLIP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 DLGAP5Q15398 846 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 EIF2S3LQ2VIR3 472 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 DPCR1Q3MIW9 517 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 FAM153CQ494X1 144 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 BEND3Q5T5X7 828 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 XRRA1Q6P2D8 792 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ZNF530Q6P9A1 599 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 CYB5R4Q7L1T6 521 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HIPK1Q86Z02 1210 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SPATA4Q8NEY3 305 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 MOSPD2Q8NHP6 518 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 SEC14L1Q92503 715 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 HDAC10Q969S8 669 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 LRRC39Q96DD0 335 aa8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 LENG8Q96PV6 779 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-203ENST00000447025 RMDN3Q96TC7 470 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms