RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZC3HC1Q86WB0 502 aaKnown RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 DENND6AQ8IWF6 608 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 CNTN4Q8IWV2 1026 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 TADA1Q96BN2 335 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 ZNF333Q96JL9 665 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 HERC2P3Q9BVR0 1158 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 RNF38Q9H0F5 515 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 PDFQ9HBH1 243 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 ABHD14A-ACY1A0A1B0GW23 586 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 C2orf78A6NCI8 922 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 H3BNC9 293 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 MUSKO15146 869 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 RASSF9O75901 435 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 STC2O76061 302 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 CSF2RAP15509 400 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 KCNA4P22459 653 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 RPS24P62847 133 aaKnown RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 MSLNQ13421 630 aaPredicted RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 NSMCE1Q8WV22 266 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 WBP2Q969T9 261 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 TRPM5Q9NZQ8 1165 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 A0A096LPK6 155 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 C2orf71A6NGG8 1288 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 AHSGP02765 367 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 FGF3P11487 239 aaPredicted RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 HOXD9P28356 352 aaPredicted RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 ALDH1A3P47895 512 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 SLC11A2P49281 568 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 CSRP3P50461 194 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 SGSHP51688 502 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 CTBP1Q13363 440 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 CLEC14AQ86T13 490 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 GPR22Q99680 433 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 TMEM120AQ9BXJ8 343 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 RHOJQ9H4E5 214 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 NSMCE4AQ9NXX6 385 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 UXTQ9UBK9 157 aaPredicted RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 TRIM33Q9UPN9 1127 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 CORO1AP31146 461 aaKnown RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 PGGT1BP53609 377 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 WDR5P61964 334 aaKnown RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 MPP1Q00013 466 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 TTC31Q49AM3 519 aaPredicted RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 TMCO4Q5TGY1 634 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 MTDHQ86UE4 582 aaKnown RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 OR7D4Q8NG98 312 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 PLD4Q96BZ4 506 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 TRMT2BQ96GJ1 504 aaKnown RBP17.66■□□□□ 0.42
SMC6-206ENST00000446852 SLC39A10Q9ULF5 831 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 ACTL7AQ9Y615 435 aa17.66■□□□□ 0.42
SMC6-206ENST00000446852 C2P06681 752 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 SERPINH1P50454 418 aaKnown RBP17.65■□□□□ 0.42
SMC6-206ENST00000446852 ARFIP2P53365 341 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 DBN1Q16643 649 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 KIAA0930Q6ICG6 404 aaPredicted RBP17.65■□□□□ 0.42
SMC6-206ENST00000446852 DENND4CQ5VZ89 1909 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 TRIM43BA6NCK2 446 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 UNC5CO95185 931 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 MPOP05164 745 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 IRF1P10914 325 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 SLC1A2P43004 574 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 KCNJ2P63252 427 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 GNA12Q03113 381 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 TWF1Q12792 350 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 STX3Q13277 289 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 RAB33AQ14088 237 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 TMEM150AQ86TG1 271 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 C10orf107Q8IVU9 208 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 TNS4Q8IZW8 715 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 TRIM43Q96BQ3 446 aaPredicted RBP17.65■□□□□ 0.42
SMC6-206ENST00000446852 PAWRQ96IZ0 340 aaKnown RBP17.65■□□□□ 0.42
SMC6-206ENST00000446852 SEMA3CQ99985 751 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 SPG21Q9NZD8 308 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 COPG2Q9UBF2 871 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 ANKRD36A6QL64 1941 aa17.65■□□□□ 0.42
SMC6-206ENST00000446852 SIN3BO75182 1162 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 URODP06132 367 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 ATXN1LP0C7T5 689 aaKnown RBP17.64■□□□□ 0.42
SMC6-206ENST00000446852 MYL2P10916 166 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 CDH4P55283 916 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 TAF12Q16514 161 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 TAF1BQ53T94 588 aaPredicted RBP17.64■□□□□ 0.42
SMC6-206ENST00000446852 SIRPB2Q5JXA9 342 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 ASRGL1Q7L266 308 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 TBC1D1Q86TI0 1168 aaPredicted RBP17.64■□□□□ 0.42
SMC6-206ENST00000446852 ARID3BQ8IVW6 561 aaPredicted RBP17.64■□□□□ 0.42
SMC6-206ENST00000446852 MFSD6LQ8IWD5 586 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 PRKD2Q9BZL6 878 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.42
SMC6-206ENST00000446852 HEY2Q9UBP5 337 aa17.64■□□□□ 0.42
SMC6-206ENST00000446852 HEATR9A2RTY3 570 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 PRRG1O14668 218 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 LAG3P18627 525 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 SKIV2L2P42285 1042 aaKnown RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 ZNF235Q14590 738 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 HSF5Q4G112 596 aaPredicted RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 RABGAP1LQ5R372 815 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms