RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 AVPR1AP37288 418 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 SERPINH1P50454 418 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 SGSHP51688 502 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARFIP2P53365 341 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 YBEYP58557 167 aaPredicted RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MPP1Q00013 466 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 IRF9Q00978 393 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 GNA12Q03113 381 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 STX3Q13277 289 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MTA1Q13330 715 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 FRG1Q14331 258 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 GRM3Q14832 879 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 GALNTL6Q49A17 601 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 RABGAP1LQ5R372 815 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 SNX30Q5VWJ9 437 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 CES4AQ5XG92 561 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MTDHQ86UE4 582 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 TNS4Q8IZW8 715 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 PLD6Q8N2A8 252 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 OR52K2Q8NGK3 314 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 OVCA2Q8WZ82 227 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MRPL17Q9NRX2 175 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 SIRPGQ9P1W8 387 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 EMCNQ9ULC0 261 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 BIRC5O15392 142 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 PLIN3O60664 434 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 PRAMEF11O60813 436 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 GSTA1P08263 222 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MBL2P11226 248 aaPredicted RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 GLDCP23378 1020 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 EPHB3P54753 998 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZBTB16Q05516 673 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 BNIP1Q12981 228 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF177Q13360 481 aaPredicted RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 RAB33AQ14088 237 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 IHHQ14623 411 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 USP10Q14694 798 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 C10orf107Q8IVU9 208 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 ANKLE1Q8NAG6 615 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 WBP2Q969T9 261 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 CEP295NLQ96MC4 621 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 C20orf27Q9GZN8 174 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 POLR1EQ9GZS1 481 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 HEY2Q9UBP5 337 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 TLK1Q9UKI8 766 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 AGO1Q9UL18 857 aaKnown RBP9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 CCL22O00626 93 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLF11O14901 512 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 MUSKO15146 869 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 PHGDHO43175 533 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 KIF1CO43896 1103 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 MPOP05164 745 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 C2P06681 752 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 MYL2P10916 166 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 GABRB3P28472 473 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 GJA8P48165 433 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARCN1P48444 511 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 CSE1LP55060 971 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 CDH4P55283 916 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 TAF1BQ53T94 588 aaPredicted RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 SIRPB2Q5JXA9 342 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 TMCO4Q5TGY1 634 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF470Q6ECI4 717 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 DDX53Q86TM3 631 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZC3HC1Q86WB0 502 aaKnown RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 SLC41A1Q8IVJ1 513 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARID3BQ8IVW6 561 aaPredicted RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 KIF2BQ8N4N8 673 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARRDC2Q8TBH0 407 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 BHMTQ93088 406 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 PLD4Q96BZ4 506 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 MYRFLQ96LU7 910 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 PRICKLE1Q96MT3 831 aaPredicted RBP9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 HERC2P3Q9BVR0 1158 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 TMEM120AQ9BXJ8 343 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 SLC40A1Q9NP59 571 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 VPS45Q9NRW7 570 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 WBP1LQ9NX94 342 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 NSMCE4AQ9NXX6 385 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZFP69BQ9UJL9 534 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 SUFUQ9UMX1 484 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
COL6A4P1-201ENST00000446690 NYNRINQ9P2P1 1898 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 HEATR9A2RTY3 570 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CBX4O00257 560 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TEX28O15482 410 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 LYPLA1O75608 230 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 DNAJC8O75937 253 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PROCP04070 461 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 RHOCP08134 193 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 DLDP09622 509 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TARSP26639 723 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARNTP27540 789 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms