RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 STRAPQ9Y3F4 350 aaKnown RBP2.84□□□□□ -1.95
UBBP3-201ENST00000445497 PLEKHM1Q9Y4G2 1056 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 PCDHGA5Q9Y5G8 931 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 PCDHA9Q9Y5H5 950 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 NR2E3Q9Y5X4 410 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 CSADQ9Y600 493 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 RNF215Q9Y6U7 377 aa2.84□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF536O15090 1300 aa2.84□□□□□ -1.96
UBBP3-201ENST00000445497 NPC1L1Q9UHC9 1359 aa2.84□□□□□ -1.96
UBBP3-201ENST00000445497 FHAD1B1AJZ9 1412 aa2.84□□□□□ -1.96
UBBP3-201ENST00000445497 UQCRHLA0A096LP55 91 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FAM240BA0A1B0GVZ2 78 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 A0A1W2PN81 502 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FAM234BA2RU67 622 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 BLACEA4D250 179 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TRIM49BA6NDI0 452 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ARGFXA6NJG6 315 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SLC22A31A6NKX4 558 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SNTNA6NMZ2 147 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FADS2P1A8MWK0 482 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 F8WDY8 70 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF701M0R085 212 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TNFRSF10AO00220 468 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FCHO1O14526 889 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FPGTO14772 594 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SLC30A4O14863 429 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 KMOO15229 486 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ALOX15BO15296 676 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 EIF3DO15371 548 aaKnown RBP eCLIP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 RRP8O43159 456 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 AKR7A2O43488 359 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TGM5O43548 720 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TRAPPC3O43617 180 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SCGB2A1O75556 95 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 GCATO75600 419 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SURF6O75683 361 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SEC14L2O76054 403 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 DXOO77932 396 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 UFL1O94874 794 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CCNB2O95067 398 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SNAPINO95295 136 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TNFRSF6BO95407 300 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ADAMTS2O95450 1211 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PTBP3O95758 552 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 GLP2RO95838 553 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 GAS8O95995 478 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ADH1CP00326 375 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TGFAP01135 160 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TFRCP02786 760 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ANXA1P04083 346 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 UQCRHP07919 91 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SPARCP09486 303 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PNMA6AP0CW24 399 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 AREGP15514 252 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 NPPBP16860 134 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 NCF2P19878 526 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CYP2A7P20853 494 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 MSR1P21757 451 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 RPA1P27694 616 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 AOAHP28039 575 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CRABP2P29373 138 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PDHA2P29803 388 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SFNP31947 248 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CHRNA7P36544 502 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ADCY8P40145 1251 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PPP1R2P41236 205 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 GPD2P43304 727 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CCR10P46092 362 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ENTPD1P49961 510 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 IDH3AP50213 366 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 RNF144AP50876 292 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ARSEP51690 589 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 STAT2P52630 851 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CEBPGP53567 150 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PRKAA2P54646 552 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PRMT2P55345 433 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 GFRA1P56159 465 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SELENOVP59797 346 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SMAD3P84022 425 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SRSF2Q01130 221 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PLOD1Q02809 727 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 IFFO1Q0D2I5 559 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CDC20Q12834 499 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SRSF5Q13243 272 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 LARS2Q15031 903 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PDK3Q15120 406 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TRIP4Q15650 581 aaPredicted RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 NTRK3Q16288 839 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 FAM187BQ17R55 369 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PRSS53Q2L4Q9 553 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 KRT24Q2M2I5 525 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 PRICKLE4Q2TBC4 344 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 HNRNPA1L2Q32P51 320 aaKnown RBP2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SLC44A4Q53GD3 710 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF667Q5HYK9 610 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TOR2AQ5JU69 321 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF484Q5JVG2 852 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 TMEM31Q5JXX7 168 aa2.83□□□□□ -1.96
UBBP3-201ENST00000445497 SPANXN2Q5MJ10 180 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms