RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 KLHDC8BQ8IXV7 354 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADGRG2Q8IZP9 1017 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 APCDD1Q8J025 514 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ZNF557Q8N988 423 aaPredicted RBP9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ARRDC2Q8TBH0 407 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 BPIFB1Q8TDL5 484 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ACDQ96AP0 544 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 RSPRY1Q96DX4 576 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ALG14Q96F25 216 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 EXOC2Q96KP1 924 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 LRRC3BQ96PB8 259 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 MGME1Q9BQP7 344 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 NAT9Q9BTE0 207 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 TMEM109Q9BVC6 243 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 TMBIM4Q9HC24 238 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 ABCB8Q9NUT2 735 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 CLDND1Q9NY35 253 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 LMCD1Q9NZU5 365 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 VPS18Q9P253 973 aa9.64□□□□□ -0.87
SMPD4P1-203ENST00000443839 MIA3Q5JRA6 1907 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 TCRBV9S1A1TA0A576 114 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 HMGB1P1B2RPK0 211 aaPredicted RBP9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 POC1B-GALNT4F8VUJ3 575 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 ATP9BO43861 1147 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 GJB3O75712 270 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 ZMPSTE24O75844 475 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 MMP2P08253 660 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 SERPINF2P08697 491 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 TPH1P17752 444 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 PGAM1P18669 254 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 HLA-FP30511 346 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 STX2P32856 288 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 SLC12A1Q13621 1099 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 KLHL38Q2WGJ6 581 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 INO80DQ53TQ3 878 aaPredicted RBP9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 TTMPQ5BVD1 217 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 KDELC1Q6UW63 502 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 OSCP1Q8WVF1 389 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 MRGPRX2Q96LB1 330 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 ATP6V1G3Q96LB4 118 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 XPO6Q96QU8 1125 aaKnown RBP9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 CYTH2Q99418 400 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 IL22Q9GZX6 179 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 STMN4Q9H169 189 aaPredicted RBP9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 CLEC1BQ9P126 229 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 CDH7Q9ULB5 785 aa9.63□□□□□ -0.87
SMPD4P1-203ENST00000443839 CDH16O75309 829 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 TBX10O75333 385 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 TCEA3O75764 348 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADH1CP00326 375 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 POLBP06746 335 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 GSTA2P09210 222 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADRA1AP35348 466 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 NPY2RP49146 381 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 SCNN1BP51168 640 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 RHOAP61586 193 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 PDAP1Q13442 181 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 LRIT3Q3SXY7 679 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 PITRM1Q5JRX3 1037 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 CERCAMQ5T4B2 595 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 KIAA1958Q8N8K9 716 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 ST13P5Q8NFI4 369 aaPredicted RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 GSDMBQ8TAX9 411 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 MRRFQ96E11 262 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 PGM2Q96G03 612 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 NOD2Q9HC29 1040 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 THG1LQ9NWX6 298 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 RABGEF1Q9UJ41 708 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 DOCK8Q8NF50 2099 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 HEPACAM2A8MVW5 462 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 INSIG1O15503 277 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 PIAS1O75925 651 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 MT-CO1P00395 513 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 PABPC1P11940 636 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 IGFBP4P22692 258 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 CHRNA4P43681 627 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 RGRP47804 291 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 SERPINH1P50454 418 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 SKOR1P84550 965 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 DLX2Q07687 328 aaPredicted RBP9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.874e-6■■■□□ 19.1
SMPD4P1-203ENST00000443839 DHCR24Q15392 516 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 CYTH1Q15438 398 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 RANBP10Q6VN20 620 aa9.62□□□□□ -0.87
SMPD4P1-203ENST00000443839 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms