RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 UNC93B1Q9H1C4 597 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 CDH7Q9ULB5 785 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 ICAM3P32942 547 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 BMXP51813 675 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 RAB39AQ14964 217 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 KCTD4Q8WVF5 259 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 NIFKQ9BYG3 293 aaKnown RBP20.53■□□□□ 0.88
SHOX2-203ENST00000441443 POLR1BQ9H9Y6 1135 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 HTR3EA5X5Y0 456 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 FAM155AB1AL88 458 aaPredicted RBP20.53■□□□□ 0.88
SHOX2-203ENST00000441443 GRIA3P42263 894 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 ACADVLP49748 655 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 PPP4R4Q6NUP7 873 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 TMEM53Q6P2H8 277 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 METTL7BQ6UX53 244 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 RIOX2Q8IUF8 465 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 TP53INP2Q8IXH6 220 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 TANKQ92844 425 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 VPS39Q96JC1 886 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 RMI1Q9H9A7 625 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 PDGFCQ9NRA1 345 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 CACNA2D2Q9NY47 1150 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 AURKCQ9UQB9 309 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 RUVBL2Q9Y230 463 aaKnown RBP20.53■□□□□ 0.88
SHOX2-203ENST00000441443 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 CORINQ9Y5Q5 1042 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 TCRBV3S1A0A5B6 114 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF12P17014 697 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 EFNA5P52803 228 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 SLC6A3Q01959 620 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 NME3Q13232 169 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 DCLRE1AQ6PJP8 1040 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 ZBTB8OSQ8IWT0 167 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 OFCC1Q8IZS5 231 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 GPC2Q8N158 579 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 DNAAF3Q8N9W5 541 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 HMGCLL1Q8TB92 370 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 MUC3BQ9H195 1237 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
SHOX2-203ENST00000441443 IARS2Q9NSE4 1012 aaKnown RBP20.53■□□□□ 0.88
SHOX2-203ENST00000441443 VTI1BQ9UEU0 232 aa20.53■□□□□ 0.88
SHOX2-203ENST00000441443 KCNK1O00180 336 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 DPYSL4O14531 572 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 TRIM24O15164 1050 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 ALDH2P05091 517 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF182P17025 639 aaPredicted RBP20.52■□□□□ 0.88
SHOX2-203ENST00000441443 GRM3Q14832 879 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 AGKQ53H12 422 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 C6orf10Q5SRN2 563 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 REP15Q6BDI9 236 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 JADE1Q6IE81 842 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 TTC30AQ86WT1 665 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF567Q8N184 647 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 SGF29Q96ES7 293 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 HNRNPABQ99729 332 aaKnown RBP20.52■□□□□ 0.88
SHOX2-203ENST00000441443 APOL2Q9BQE5 337 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 TLK1Q9UKI8 766 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 DLGAP1O14490 977 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 MAFO75444 373 aaPredicted RBP20.52■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF460Q14592 562 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 TARBP2Q15633 366 aaKnown RBP20.52■□□□□ 0.88
SHOX2-203ENST00000441443 NEDD8Q15843 81 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 PPP1R26Q5T8A7 1209 aaPredicted RBP20.52■□□□□ 0.88
SHOX2-203ENST00000441443 MPZL3Q6UWV2 235 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 PID1Q7Z2X4 250 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 SPNS2Q8IVW8 549 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 CYGBQ8WWM9 190 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 PBXIP1Q96AQ6 731 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 FBXL20Q96IG2 436 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 EFHD1Q9BUP0 239 aa20.52■□□□□ 0.88
SHOX2-203ENST00000441443 ZCWPW2A0A1B0GU75 182 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 LACTBL1A8MY62 500 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SDHDO14521 159 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 GABBR2O75899 941 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 INHBBP09529 407 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 GRM5P41594 1212 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 GNA12Q03113 381 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 IFRD2Q12894 506 aaPredicted RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 TRAF2Q12933 501 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 LRP8Q14114 963 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 ATF7IP2Q5U623 682 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 EGFLAMQ63HQ2 1017 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 LCLAT1Q6UWP7 414 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 FSTL5Q8N475 847 aaPredicted RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 KDM1BQ8NB78 822 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SLC7A14Q8TBB6 771 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 ADI1Q9BV57 179 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 IL22Q9GZX6 179 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 LRRC40Q9H9A6 602 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 TMPRSS4Q9NRS4 437 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 GTSE1Q9NYZ3 720 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 MGAMO43451 1857 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 DLX3O60479 287 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 HNRNPLP14866 589 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 CDH3P22223 829 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 YAP1P46937 504 aaKnown RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 CYP2A13Q16696 494 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 CCDC92Q53HC0 331 aaPredicted RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 CERCAMQ5T4B2 595 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SPAG4Q9NPE6 437 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms