RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PCED1AQ9H1Q7 454 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 DYRK4Q9NR20 520 aa18.31■□□□□ 0.52
CPSF4-205ENST00000440514 DDX56Q9NY93 547 aaKnown RBP18.31■□□□□ 0.52
CPSF4-205ENST00000440514 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-205ENST00000440514 GRID2IPA4D2P6 1211 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PLRG1O43660 514 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PALMO75781 387 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PEX11BO96011 259 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 UGT2B4P06133 528 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF806P0C7X5 589 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PPP2CBP62714 309 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PPP2CAP67775 309 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 SLC10A7Q0GE19 358 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 GALNT2Q10471 571 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 KIF5AQ12840 1032 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 LBRQ14739 615 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 ODF2Q5BJF6 829 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 WDR45BQ5MNZ6 344 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 SYCP2LQ5T4T6 812 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 TMCO4Q5TGY1 634 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 KIAA0895LQ68EN5 471 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 MFSD7Q6UXD7 560 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PARS2Q7L3T8 475 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 ZCCHC9Q8N567 271 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PLD5Q8N7P1 536 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 TSEN2Q8NCE0 465 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 OR2T34Q8NGX1 318 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 KRT35Q92764 455 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 BIRC7Q96CA5 298 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PPP1R16AQ96I34 528 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 CINPQ9BW66 212 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 MIR1-1HGQ9H1L0 117 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 EIF2B4Q9UI10 523 aaKnown RBP18.3■□□□□ 0.52
CPSF4-205ENST00000440514 ADGRG1Q9Y653 693 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 SLCO1B1Q9Y6L6 691 aa18.3■□□□□ 0.52
CPSF4-205ENST00000440514 PLXNA2O75051 1894 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 LRRC72A6NJI9 287 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF487B1APH4 448 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 MUSKO15146 869 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ARHGAP6O43182 974 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 SLC7A4O43246 635 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 GJB3O75712 270 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 PIGNO95427 931 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 IGHV4-34P06331 123 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ITGB7P26010 798 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 NEK3P51956 506 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 TAS2R38P59533 333 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 DYNLT1P63172 113 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 CCZ1BP86790 482 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 CCZ1P86791 482 aaPredicted RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ERN2Q76MJ5 926 aaKnown RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 RFX6Q8HWS3 928 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 KATNAL2Q8IYT4 538 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 GPR161Q8N6U8 529 aaKnown RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 C12orf50Q8NA57 414 aaPredicted RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.29■□□□□ 0.52
CPSF4-205ENST00000440514 LRRN4Q8WUT4 740 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF599Q96NL3 588 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF292O60281 2723 aa18.29■□□□□ 0.52
CPSF4-205ENST00000440514 APOL1O14791 398 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 CFIP05156 583 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 GARSP41250 739 aaKnown RBP18.28■□□□□ 0.52
CPSF4-205ENST00000440514 DPP6P42658 865 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 CDKN2BP42772 138 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 SLC10A2Q12908 348 aaPredicted RBP18.28■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF235Q14590 738 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 RFTN1Q14699 578 aaPredicted RBP18.28■□□□□ 0.52
CPSF4-205ENST00000440514 LLGL1Q15334 1064 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 TRIM61Q5EBN2 209 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 SLC9A4Q6AI14 798 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 NPNTQ6UXI9 565 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 GDPD4Q6W3E5 623 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 SPOCD1Q6ZMY3 1216 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 DNASE2BQ8WZ79 361 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 LRIG1Q96JA1 1093 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 KLHL32Q96NJ5 620 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 HDAC8Q9BY41 377 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 FSCN3Q9NQT6 498 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 RXFP3Q9NSD7 469 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 DTLQ9NZJ0 730 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 SEPT3Q9UH03 358 aa18.28■□□□□ 0.52
CPSF4-205ENST00000440514 FRYLO94915 3013 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3DA0A087WVF3 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3IA0A087WXS9 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3EA0A087X179 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3KA0A087X1G2 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 LNP1A1A4G5 178 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3FA6NER0 549 aaPredicted RBP18.27■□□□□ 0.52
CPSF4-205ENST00000440514 C16orf96A6NNT2 1141 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 C10orf142B7Z368 130 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3LB9A6J9 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 KHNYNO15037 678 aaKnown RBP18.27■□□□□ 0.52
CPSF4-205ENST00000440514 GDF9O60383 454 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3HP0C7X1 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 KRT10P13645 584 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms