RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 NR1I3Q14994 352 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PARP15Q460N3 678 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 E4F1Q66K89 784 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PLEKHA7Q6IQ23 1121 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 DBX2Q6ZNG2 339 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 DNAAF5Q86Y56 855 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 BAHD1Q8TBE0 780 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 NCAPGQ9BPX3 1015 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 FZD3Q9NPG1 666 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 GPATCH2LQ9NWQ4 482 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PCSK1NQ9UHG2 260 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 MSRB2Q9Y3D2 182 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PTPRBP23467 1997 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 C10orf142B7Z368 130 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 RASA4BC9J798 803 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 EEF2KO00418 725 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 RASA4O43374 803 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 UGT2B4P06133 528 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 ATXN1LP0C7T5 689 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 MYBL1P10243 752 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 HNRNPA2B1P22626 353 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 EPHA8P29322 1005 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 HTR7P34969 479 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 YBEYP58557 167 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 ATXN7L2Q5T6C5 722 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 KIAA1161Q6NSJ0 714 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 PARS2Q7L3T8 475 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 CASKIN2Q8WXE0 1202 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 HMCESQ96FZ2 354 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 LRIG1Q96JA1 1093 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 CALN1Q9BXU9 219 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 OSBPL1AQ9BXW6 950 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 TTYH3Q9C0H2 523 aa20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 MRPL47Q9HD33 250 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-204ENST00000440118 TMEM8BA6NDV4 472 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 EIF3CLB5ME19 914 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 RNF103O00237 685 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 DDX3XO00571 662 aaKnown RBP eCLIP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 POP4O95707 220 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 CD160O95971 181 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 TPM3P06753 285 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 THEGLP0DJG4 465 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 GKP32189 559 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 RPS21P63220 83 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 ZNF284Q2VY69 593 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 ZNF805Q5CZA5 627 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 PPP6R3Q5H9R7 873 aaPredicted RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 FIGNQ5HY92 759 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 SEL1L3Q68CR1 1132 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 PTAR1Q7Z6K3 402 aaPredicted RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 SLCO6A1Q86UG4 719 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 PLPP6Q8IY26 295 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 ZCCHC14Q8WYQ9 949 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 ARHGEF26Q96DR7 871 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 FEM1CQ96JP0 617 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 EIF3CQ99613 913 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 ERVMER34-1Q9H9K5 563 aa20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 COL5A1P20908 1838 aaPredicted RBP20.17■□□□□ 0.82
SHROOM1-204ENST00000440118 XPAP23025 273 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 SGCGQ13326 291 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 HS1BP3Q53T59 392 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 ERMARDQ5T6L9 678 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 SPATS2Q86XZ4 545 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 EID2Q8N6I1 236 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 PAF1Q8N7H5 531 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 CPLX3Q8WVH0 158 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 GATA6Q92908 595 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 RAB7BQ96AH8 199 aa20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 CNDP2Q96KP4 475 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 SNRNP25Q9BV90 132 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 UBA2Q9UBT2 640 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 BZW2Q9Y6E2 419 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 GOLGA4Q13439 2230 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-204ENST00000440118 ANKRD36A6QL64 1941 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 TMEM191CA6NGB0 347 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 C16orf96A6NNT2 1141 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 WASH4PA8MWX3 477 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 SDC3O75056 442 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 LDOC1O95751 146 aaPredicted RBP20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 SERINC3Q13530 473 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 MYLK3Q32MK0 819 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 CFAP58Q5T655 872 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 GDPD4Q6W3E5 623 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 ZSCAN30Q86W11 494 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 UMODL1-AS1Q8N2C9 162 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 TMEM145Q8NBT3 493 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 SAP25Q8TEE9 199 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 FNIP1Q8TF40 1166 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 IQCDQ96DY2 449 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 CELF6Q96J87 481 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 EXOC2Q96KP1 924 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 KLHL32Q96NJ5 620 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 NOL6Q9H6R4 1146 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 ZFR2Q9UPR6 939 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 FADS3Q9Y5Q0 445 aa20.15■□□□□ 0.82
SHROOM1-204ENST00000440118 A0A1W2PQJ5 194 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 ARHGAP42A6NI28 874 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 A6NNZ2 444 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 ENC1O14682 589 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 TSPAN6O43657 245 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms